Input parameters:

  Query = ENSMUSP00000069782 (Len=325)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000069782, Len=325):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MQLNYAVKTLLGPAYGSPIEHAQVLPVKSTLELQKRYLVFINKDKVGLQILPVDGNPHKTCAIVCHPNGVAGMALSYDGR 80  
WD40-rpts                                                        (____________________WD 1_____

Query       81 FAFTAGGQDRSVVQWKINLGALEAAVSLGGEDLTPFYGLVSGGREGKFYRELEDYFYYSQIRSQGIDTMETRQVSEHICL 160 
WD40-rpts      _______________)                                                                

Query      161 SELPFVMRAIGFYPSEEKIEDMFNEIKFSEYVETGKLIDKINLPDFLKVYLNHRPPFGNTMDGIQNSFNVLGYTNSEGKK 240 
WD40-rpts                                                                                      

Query      241 AIRREDFLNLLLTKGEHMTEEEMIDCFSTLFGLTPEGWKSEPAATCINGPEICLQKELPEEITAEIFTTEILGLTLSDSS 320 
WD40-rpts                                                                                      

Query      321 EQLIQ 325 
WD40-rpts           

1 WD40-repeats found in QUERY=ENSMUSP00000069782 (Len=325):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    51-96       3.50  259.43  0.01969       22.5%     32.54

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   51-96     LPVDGNPHKTCAIVCHPNGVAGMALSYDGRFAFTAGGQDRSVVQWK

   WD40 Template    TG-----ECLRTLSGHTSGVTSVSFSPDGKRLVS-GSEDGTIKVWD