Input parameters:

  Query = ENSMUSP00000068649 (Len=175)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000068649, Len=175):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 RTPPSTNLGSLPPSSSSAAWAPRPATRQALPVAAFLARESGHSRSTLGVIVLRSLREASPGASGLRRVGATFGKRTVGRE 80  
WD40-rpts      (___________________________WD 1__________________________)                     

Query       81 GRHLGLNAERRELRVRPEALRRRGRGALREAAVSPAPRAPCGGRKAPNWAARTVVAEPRRAATEVTLGGPGEPRTAAGAA 160 
WD40-rpts                                                                                      

Query      161 TQQRRPRACGIGHGT 175 
WD40-rpts                     

1 WD40-repeats found in QUERY=ENSMUSP00000068649 (Len=175):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-59       2.82  231.30  0.04651       17.5%     -8.73

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-59     RTPPSTNLGSLPPSSSSAAWAPRPATRQALPVAAFLARESGHSRSTLGVIVLRSLREAS

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGK--RL------------VSGSEDGTIKV-----WD