Input parameters:

  Query = ENSMUSP00000066222 (Len=185)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000066222, Len=185):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGQCLRYQMQWEDLEEYQALTFLTRNEILCIHDTFLKLCPSGKHYKEATLTMDQVSSLPALRVNPFRDRICRVFSHDNVF 80  
WD40-rpts      (_________________________________________________________________________WD 1__

Query       81 SFEDVLGMASVFSEQACPSLKIEYAFRIYDFNENGFIDEEDLEEIVLRLLKSDDASEDLLMDVMHHVLSESDLDNDSMLS 160 
WD40-rpts      _______________________________________________________________________)        

Query      161 FSEFEHAMAKSPDFMNSFRIHFWGC 185 
WD40-rpts                               

1 WD40-repeats found in QUERY=ENSMUSP00000066222 (Len=185):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-152      2.84  231.89  0.04569       32.5%     -13.52

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-152    MGQCLRYQMQWEDLEEYQALTFLTRNEILCIHDTFLKLCPSGKHYKEATLTMDQVSSLPALRVNPFRDRICRVFSHDNVFSFEDVLGMASVFSEQACPSLKIEYAFRIYDFNENGFIDEEDLEEIVLRLLKSDDASEDLLMDVMHHVLSESD

   WD40 Template    TGECLRTLSG------------HT-----------------------SGV----------TSVS---------FSPDGKRL------------VSGS---------------EDGTIK----------------VW---------------D