Input parameters:

  Query = ENSMUSP00000064180 (Len=566)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000064180, Len=566):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MCIHQLNLLATNPNLPITSVLGKQHPIEARHLSSICDIMEKAMVNGDTCIVRCILVVFQVVFKFFFSPQTERNRDIIRRS 80  
WD40-rpts                                                  (___________________________________

Query       81 GLLLWQLLMAPKDQICPEIQKEVCLAISSGLNILYPGETEINNLLKLVLTEVSGERNSGLSQLRDVILTNLAEQLQNNRF 160 
WD40-rpts      ___________________________________________WD 1_________________________________

Query      161 GSDEDDHYRLNDELLHYILKIVVRESCILITKCQTVSKDDFQKLLSTVPAASSCLRYLMAVQNHLLSNTVLIKPDENEDS 240 
WD40-rpts      ____________________________________________)                                   

Query      241 DSSLQGETLKELKTSILALATQILTGCDEVLEMLQQVTTALINSDIPDREQRLKGLEQVTKATMLGHLLPVLLTSLMHPN 320 
WD40-rpts                                                                                      

Query      321 LQTLTMADALMPQLVQLVLYTSQTALLLKTQCPAFAEMSCSPCGTSDQKCRLFPDERMLEEKEEPGFLTGLKIPAPWAAG 400 
WD40-rpts                                                                                      

Query      401 KTVETVHPVRDNYKFKETVHIPGARCLYLRFDTRCSSQYDYDKLVIYAGPNTNSRKVAEYGGNTLGYGSRSVLGTGWPKD 480 
WD40-rpts                                                                                      

Query      481 LVKVEGDTVTFSFEMRSGREHNTPDKAMWGFACTVRAQESSEDVSGGLPFLVDLALGLSVLACSMLRILYNGPEITKEEE 560 
WD40-rpts                                                                                      

Query      561 ACQDLL 566 
WD40-rpts            

1 WD40-repeats found in QUERY=ENSMUSP00000064180 (Len=566):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    45-205      2.88  233.83  0.04308       22.5%      7.14

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   45-205    NGDTCIVRCILVVFQVVFKFFFSPQTERNRDIIRRSGLLLWQLLMAPKDQICPEIQKEVCLAISSGLNILYPGETEINNLLKLVLTEVSGERNSGLSQLRDVILTNLAEQLQNNRFGSDEDDHYRLNDELLHYILKIVVRESCILITKCQTVSKDDFQKLL

   WD40 Template    TGECLRTL--------------SGHTSG----------------------VT-------------SVSFSPDG----------------KRLVSGS-----------------------EDGTIKVW---------------------------D------