Input parameters:

  Query = ENSMUSP00000059426 (Len=1456)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000059426, Len=1456):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVPTILLSALLLHFTDVVAAEPRYILWVSSVVQRFSSEKACLHLLNLNESVSLSVTLEYDGSSTTIFDQPVDEGNFYACA 80  
WD40-rpts                                                                                      

Query       81 DFKVSQMSSEQLAFVALLVQGNTLKISERRSVAIAAEENATFVQTDTPVHKPGDTVHFRVVTLNIWLKPVDDLYPLITVQ 160 
WD40-rpts                                                                                      

Query      161 DPQSNVIFQWINVTTFRNITQLSFQLTPEPILGDYTIVIKTQSGTTVMDHFTVNRDVLPKFEVELTAPETITIADSQFQM 240 
WD40-rpts                                                                                      

Query      241 VTCAKYTYGQPVQGKAQIKVCRELFSPAHCESNENEICEQFTVQLKDGCASHIINTKVFQLDRSGLFMTLNVNEVVTESG 320 
WD40-rpts                                                                                      

Query      321 TGVQMSKTHSVFITSVLGTVSFENMDPFYRRGITYFGTLKFSGPNNTPLVDKLLQLELDGKPVGNYTTDENGEARFSINT 400 
WD40-rpts                                                                                      

Query      401 SEIFGAQISLKAVYVRPRSCHRSSWLSPEYLDAYFSASRFYSQTSSFTKIILEPKQLPCDQEKMFSVLYSLNPEAYKEAS 480 
WD40-rpts                                                                                      

Query      481 DVTFFYLVMVRGGISRSGQKQVRVQAWNGNFSFPISINADLAPSADLFVYTLHPSGEIVADNVRLQIEKCFKNKVSINFS 560 
WD40-rpts                                                                                      

Query      561 RDKDLPGSNTSVHLQAAPDSFCALRAVDKSALLLNHGQEMTPESVYFTLPYIHQYGYFYNGLNLDDQQAEPCIPQKDLFY 640 
WD40-rpts                                                                                      

Query      641 NGLYYTPTGNIWDGDLSNLLSNMGLKIFTNLHYRKPEVCSSQENQPLLRTFDHPNERIMMYGGGAPPSSAFHDSVDSISH 720 
WD40-rpts                                                                                      

Query      721 AKVAIKETVRTNFPRTWIWNLVSVDSSGTANVSFLVPDTITQWEASAFCVNGNAGFGISPKVSLQISQPFFVEVTSPFSV 800 
WD40-rpts                                                                                      

Query      801 VRSEQSDMVVTVFNYLTTCVEISVQLEASENYEASINTQRNTDSEVLQAGEQKTYVWTIIPKTLGKVNVTVVATSKQSRA 880 
WD40-rpts                                                                                      

Query      881 CPNDASKEQDVHWKDTVVKTMLVEAEGIEKEATQSFLICPKGTKASKQTLLELPSNVVEGSVRSFVTIVGDILGVAMQNL 960 
WD40-rpts                                                                                      

Query      961 ESLLQMPYGCGEQNIAQLASDVYILDYLKATDQLTEELKSKAQRLLSNGYQNHLSFKNYDGSYDVFCQSNQEGSTWLSAL 1040
WD40-rpts                                                                                      

Query     1041 SFKTVEKMKEYIFIEETVPKQTLIWLVKKQKSNGCFRRDEKHVDTAQEGREGDQEDIALTAYVVGVFLEVGLNASFPALR 1120
WD40-rpts                                                                                      

Query     1121 NGLYCLEEAFSNGVTNGYTQAILAYVFALAGKEQQAKSLLSILDKSATKTNNMIYWERDEKPETDNSPSFIPSALSGETE 1200
WD40-rpts                                                                                      

Query     1201 KTCYVLLAVLSQDTQDLDYASKIVQWLAQRMNSHGGFSAMQDTTVCLLALTQYMKLTGSNPQNTITLSSEESEEVFYVNR 1280
WD40-rpts                                                                                      

Query     1281 NKRLLVQHSKVSKGHQQYTVDVEGDGCSFIQATLRYNVPLPKEASGFSLSVKTGKSNSSDEFQTKFELTVTLTYTGARES 1360
WD40-rpts                                                                                      

Query     1361 SVTVLVDVKMLSGFTPVVSSTEELKFNSQVTKTDIKNGHVLFYLENVPKEATSLTFSIEQTNHVANIQPAPVTVYSYEKG 1440
WD40-rpts                                          (_________________WD 1_________________)    

Query     1441 EYAFDSYNINSISDSQ 1456
WD40-rpts                      

1 WD40-repeats found in QUERY=ENSMUSP00000059426 (Len=1456):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 66  1397-1436     2.77  229.03  0.04983       22.5%     34.26

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1397-1436   NGHVLFYLENVPKEATSLTFSIEQTNHVANIQPAPVTVYS

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD