Input parameters:

  Query = ENSMUSP00000058175 (Len=466)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000058175, Len=466):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAIHLPCLPMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKLCQKRWLYCDMDTLQLQGKETWKQFFIDRIWQERAK 80  
WD40-rpts                                                                                      

Query       81 FRAKAKDFTYKEIPLMCGLFGYACYISGCGLTRKGQDKSVVCMVNSKNTISTWDVHKSVITWKSPEQPASIKLLTTLPEM 160 
WD40-rpts                   (__________________WD 1_________________)   (_________________WD 2_

Query      161 HIAVTVDIQSTIKLWDCHNREALATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFRIPDLYLISTVNVLPYGFDGIY 240 
WD40-rpts      _______________)   (_________________WD 3_________________)   (_________________

Query      241 CSPQKKWVLLSKKHPHILPKVFYMSSFLRTSEFSAPVSTVLKLSLYERVFWTPRREDRITLMSRSGFPQVKMFETYDIKL 320 
WD40-rpts      WD 4________________)   (_________________WD 5________________)                 

Query      321 EEFGNKRIVKGKLIASFELQCHKVNPQRFGVSDKNVIVCSTESSLLLFDINGLRLKTFQYCPEMIVKLSVDPLHVIVICN 400 
WD40-rpts                (_________________WD 6________________)  (_________________WD 7_______

Query      401 TGSMDVYAWEERSLLLRKCYRLHIERPLPLYGFIYKAACDDVSIIQLITDELSLSSLTSYALNICS 466 
WD40-rpts      _________)                                                        

7 WD40-repeats found in QUERY=ENSMUSP00000058175 (Len=466):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    94-134      5.09  324.81  0.00261       22.5%     35.09
  WD 2:  Seg  5   138-176      7.93  442.38  6.8e-05       17.5%     50.13
  WD 3:  Seg  9   180-219      6.01  362.99  0.00080       22.5%     55.44
  WD 4:  Seg 13   223-261      7.16  410.23  0.00018       15.0%     51.42
  WD 5:  Seg 17   265-303      5.65  348.25  0.00126       15.0%     36.55
  WD 6:  Seg 22   331-369      6.64  388.79  0.00036       15.0%     37.72
  WD 7:  Seg 26   372-410      7.22  412.97  0.00017       15.0%     37.84

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   94-134    PLMCGLFGYA-CYISGCGLTRKGQDKSVVCMVNSKNTISTWD
   WD 2  138-176    -SVI-TWKSP-EQPASIKLLTTLPEMHIAVTVDIQSTIKLWD
   WD 3  180-219    -REA-LATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFR
   WD 4  223-261    -LYL-ISTVN-VLPYGFDGIYCSPQKKWVLLSKKHPHILPKV
   WD 5  265-303    -SSF-LRTSE-FSAPVSTVLKLSLYERVFWTPRREDRITLMS
   WD 6  331-369    -GKL-IASFE-LQCHKVNPQRFGVSDKNVIVCSTESSLLLFD
   WD 7  372-410    -GLR-LKTFQ-YCPEMIVKLSVDPLHVIVICNTGSMDVYAWE

   WD40 Template    TGEC-LRTLS-GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD