Input parameters:

  Query = ENSMUSP00000053913 (Len=403)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000053913, Len=403):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MWWLLATTCCVLLSGPIDGYKQESITNPEANMNIVCVFQSELISYWGYPYEKHDVITEDGYILGTYRIPHGKGCSRKTAP 80  
WD40-rpts                                                                                      

Query       81 KAVVYLQHGLIASANNWICNLPNNSLAFLLADSGYDVWLGNSRGNTWSRNHLRLSPKSPQYWAFSWDEMAKYDLPATVNL 160 
WD40-rpts                                                                                      

Query      161 ILEKSGQKQLFYVGHSQGTTIAFIAFSTNPELAKKIRLFFALAPVATVKYTRSPMKKLTTLSRKAVKVLFGDKMFSTHTW 240 
WD40-rpts          (_______________________________________________________________________WD 1

Query      241 FEQFIATKVCNRKLFHQLCSNFLFSLSGFDPQNLNMSRLDVYLSQSPAGTSVQNMLHWAQAVNSGQLQAFDWGNPDQNMM 320 
WD40-rpts      ______________________________________________________________________)         

Query      321 HFNQLTPPVYNISKMRVPTAMWSGGQDVVADAKDTKNLLPKIANLIYYKEIPHYNHMDFYLGQDAPQEVYGDLIRMIEES 400 
WD40-rpts                                                                                      

Query      401 LQN 403 
WD40-rpts         

1 WD40-repeats found in QUERY=ENSMUSP00000053913 (Len=403):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   165-311      3.69  266.90  0.01565       25.0%     15.07

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  165-311    SGQKQLFYVGHSQGTTIAFIAFSTNPELAKKIRLFFALAPVATVKYTRSPMKKLTTLSRKAVKVLFGDKMFSTHTWFEQFIATKVCNRKLFHQLCSNFLFSLSGFDPQNLNMSRLDVYLSQSPAGTSVQNMLHWAQAVNSGQLQAFD

   WD40 Template    TGECLRTLSGHT--------------------------SGVTSVSFSPD-----------------GKRLVSG-------------S----------------------ED-------------GT----------------IKVWD