Input parameters:

  Query = ENSMUSP00000032326 (Len=455)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000032326, Len=455):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAADEEPDSPSGALQTAAEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80  
WD40-rpts                                                                 (____________________

Query       81 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENT 160 
WD40-rpts      ______________________WD 1__________________________________________)           

Query      161 KGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQ 240 
WD40-rpts                                                                                      

Query      241 YYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLAT 320 
WD40-rpts                                                                                      

Query      321 DVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDEEVMMLT 400 
WD40-rpts                                                                                      

Query      401 ERVNEAQRFARMELREHGEKKKRKREDAGDDDDKEGAIGVRNKVAGGKMKKRKGR 455 
WD40-rpts                                                             

1 WD40-repeats found in QUERY=ENSMUSP00000032326 (Len=455):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    60-149      3.25  248.86  0.02723       20.0%     35.17

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   60-149    QGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIAT

   WD40 Template    TGECLRTLSGHTSG-------------------VTSVSFSPD--------------------GKRLVSGSEDG-----------TIKVWD