Input parameters:

  Query = ENSMUSP00000024774 (Len=201)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000024774, Len=201):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGQQLSWEEAEAAGEMDVAELQEWYKKFVVECPSGTLFMHEFKRFFKVTGNEEASQYVESMFRAFDKNGDNTIDFLEYVA 80  
WD40-rpts      (________________________________________________WD 1___________________________

Query       81 ALNLVLRGSLEHKLKWTFKIYDKDRNGCIDRLELLDIVEAIYKLKKACRAELDLEHQGQLLTPEEVVDRIFLLVDENGDG 160 
WD40-rpts      _____________________)                                                          

Query      161 QLSLTEFIEGARRDKWVMKMLQMDINPGCWITQQRRRSAMF 201 
WD40-rpts                                               

1 WD40-repeats found in QUERY=ENSMUSP00000024774 (Len=201):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-102      2.77  229.24  0.04951       15.0%     -12.63

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-102    MGQQLSWEEAEAAGEMDVAELQEWYKKFVVECPSGTLFMHEFKRFFKVTGNEEASQYVESMFRAFDKNGDNTIDFLEYVAALNLVLRGSLEHKLKWTFKIYD

   WD40 Template    TGECLR------TLSGH------------TSGVTSVSF----------SPDGK-------------RLVSGSED------------GTI---------KVWD