Input parameters:

  Query = ENSMUSP00000021153 (Len=356)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000021153, Len=356):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIM 80  
WD40-rpts                                                                                      

Query       81 AYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQY 160 
WD40-rpts                                                   (__________________________________

Query      161 IQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 240 
WD40-rpts      WD 1__________________________________)                                         

Query      241 ITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESPIDEVVVTNTVPHELQKLQC 320 
WD40-rpts                                                                                      

Query      321 PKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 356 
WD40-rpts                                          

1 WD40-repeats found in QUERY=ENSMUSP00000021153 (Len=356):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   126-199      3.40  255.30  0.02235       12.5%     24.88

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  126-199    GLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLGLAVIH

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVS-------------------GSEDGT---------------IKVWD