Input parameters:

  Query = ENSDARP00000112439 (Len=632)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000112439, Len=632):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEDMEVVMVSESGSSTEEEENDVAASVPEDRSRLPLRRAPRRRQIISQRPHAERVRRIQTLLQNTHNPPDTHNPPDTRTD 80  
WD40-rpts                                                                                      

Query       81 PEPASSDSADQSRVQSTAETSSPAGPSVPAAAEAPAVELKTEVEASSDSSGSAAASPAGAADEADTEGESCSICFEPWTT 160 
WD40-rpts                                                                                      

Query      161 AGEHRLAALRCGHLFGYVCISRWLTGGGNKCPQCNKPAKKTQIIFLYARRLKALDNTEEVRLKSRLELEQGSRRMEQLEV 240 
WD40-rpts                                                                                      

Query      241 AQCRQQLQLMVDENTRLRKEVEELRRWKAQASAGSSQAASLSSSQRQDSGHYVFSKAVLVSQTGGSRVLAHCEPLGCLLA 320 
WD40-rpts                                                                                      

Query      321 SQPSPQATLMPGFGVKKISTATLKASQYVHIHSKQIRGLAFSQQQDGLLLSAALDNTIKLTSLMTNTVVQAYNTGRPVWS 400 
WD40-rpts                         (___________________WD 1__________________)                  

Query      401 CCWCHDNNNYIYAGLSNGSVLVYDTRDTSTHVQELRPLRSSCPVVSLSYIPHSSTSSSFPCGGVIAGTLEGGCFWERHND 480 
WD40-rpts                                                                                      

Query      481 NTHTPHILPLESGNCTHIQAEAESRHCLVTYRPGRLNPSLRCVLMELSRTPQVDLQSSVCSCSPVQTFSAGSSCKLLTKN 560 
WD40-rpts                                                                                      

Query      561 CVFRSPAGGGAALVCAGDEATNSTMVWDAGTGALLQKMPADLPVLDICPFEANQSSFLASLTEKMIKVYKWE 632 
WD40-rpts                                                                              

1 WD40-repeats found in QUERY=ENSDARP00000112439 (Len=632):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  9   340-382      2.94  236.23  0.04004       25.0%     35.93

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  340-382    TATLKASQYVHIHSKQIRGLAFSQQQDGLLLSAALDNTIKLTS

   WD40 Template    TG--ECLRTLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD