Input parameters:

  Query = ENSDARP00000112306 (Len=362)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000112306, Len=362):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MIGRLVCQSERRAAAHGSAGATLTSLVFLQLLQQQSQVQVQSRRRMSVGFIGAGQLAHAMVKGFTAAGVIAANRITASSP 80  
WD40-rpts                                                                                      

Query       81 DTELPTVSGLRKMGVNLTTSNKEATHRSDVLFLAVKPHIIPFVLDEIGPDIEDRHLIVSCAAGVTISSIEKKLLQYRESP 160 
WD40-rpts                                                                                      

Query      161 KVMRCMTNTPVVVREGATVYATGTHAHLEDGKLLEQLMASVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKM 240 
WD40-rpts                    (_________________________________________________________________

Query      241 GLPRRLAVRLGAQALMGAAKMLLDSEQHPGQLKDNVCSPGGATIHALHFLESGGFRSLLINAVEASCIRTRELQSLADQE 320 
WD40-rpts      ______________WD 1______________________________________________________________

Query      321 QISAAAIKKTTLDKVLQQPGVTHNSVGTRSRVNLFNNRSKKS 362 
WD40-rpts      ________________)                         

1 WD40-repeats found in QUERY=ENSDARP00000112306 (Len=362):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   175-337      3.17  245.73  0.02997       20.0%      5.24

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  175-337    EGATVYATGTHAHLEDGKLLEQLMASVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALMGAAKMLLDSEQHPGQLKDNVCSPGGATIHALHFLESGGFRSLLINAVEASCIRTRELQSLADQEQISAAAIKKTTLDKVLQ

   WD40 Template    TGECLRTLSGHTS--------------------------GVTSVSFS---------------------P---------------------DGKR-------LVSGS------------ED-----------------------GTIKVW-------------D