Input parameters:

  Query = ENSDARP00000112282 (Len=485)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000112282, Len=485):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 GFICSENGDESSSDESAQSPGAEKCCLASDLMKLCGETKARNKARRRTTTQMELLYAHSGDPDAPPEDFSSPLLPVVESP 80  
WD40-rpts        (________________________WD 1________________________)   (_________________WD 

Query       81 EGNKELTPAPYSGDREPVTKINAVQSEVNSSARSPTATERKSLDRSPLTRRRMQERSQNHTDRSRTLDKPGVASPALAAR 160 
WD40-rpts      2________________)_______________WD 3_______________)(_______________WD 4_______

Query      161 SSRAARLQCVHVAEGHTKPLLCLDSTDDLLFTGSKDRTCKVWNLVTGQEIMSLGDHPSSVVSVRYCSSLVFTVSTAYVKV 240 
WD40-rpts      ________)______________WD 5_______________)   (_______________WD 6______________

Query      241 WDIRDSAKCIRTLTSSGQVSQGDACGGSAVAIPPGENQINQIALNPSGTFLYAASGNTVRMWDLRRFVSTGKLTGHLGPV 320 
WD40-rpts      _)                       (________________WD 7________________)   (_____________

Query      321 MCLTVDQMGKGQDVVITGSKDHTVKMFDVLEGAQGSISAAHHFDPAHQDGLEAVATQGDSLFTAARDSCIKKWDLASKQM 400 
WD40-rpts      _____WD 8__________________)                                         (__________

Query      401 QEQVERAHCDPLSSLAVVPGSSAVVTGCKGGLLKFWHTHTLRALGEVRGHESSVNDVCTNSSQLFTASDDRTVKIWQVKG 480 
WD40-rpts      ___________WD 9_____________________)   (________________WD10_______________)   

Query      481 CLEDG 485 
WD40-rpts           

10 WD40-repeats found in QUERY=ENSDARP00000112282 (Len=485):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     3-56       5.00  321.21  0.00292        2.5%     38.88
  WD 2:  Seg  5    60-98       5.90  358.45  0.00092       15.0%     24.42
  WD 3:  Seg  7    97-133      3.69  266.91  0.01564       15.0%     28.50
  WD 4:  Seg 10   134-169      6.58  386.57  0.00038        5.0%     33.13
  WD 5:  Seg 12   168-203      7.05  405.75  0.00021       30.0%     49.08
  WD 6:  Seg 16   207-242      6.53  384.58  0.00041       32.5%     50.12
  WD 7:  Seg 21   266-303      6.41  379.65  0.00048       20.0%     49.27
  WD 8:  Seg 25   307-348      7.92  441.82  6.9e-05       30.0%     53.49
  WD 9:  Seg 32   390-437      8.27  456.10  4.4e-05       20.0%     39.47
  WD10:  Seg 36   441-477      7.50  424.52  0.00012       30.0%     55.90

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    3-56     ICSENGDESSSDESAQSPGAEKCC--------LASDLMKLCGETKAR---NKARRRTTTQMELLY
   WD 2   60-98     -G--------------DPDAPPED--------FSSPLLPVVESPEGN---KELTPAPYSGDREPV
   WD 3   97-133    -----------------PVTKINA--------VQSEVNSSARSPTAT---ERKSLDRSPLTRRRM
   WD 4  134-169    ------------------QERSQN--------HTDRSRTLDKPGVAS---PALAARSSRAARLQC
   WD 5  168-203    ----------------QCVHVAEG--------HTKPL--LCLDSTDD---LLFTGSKDRTCKVWN
   WD 6  207-242    -G--------------QEIMSLGD--------HPSSVVSVRYCSSLV---FTVS---TAYVKVWD
   WD 7  266-303    -G--------------GSAVAIPP--------GENQINQIALNPSGT---FLYAAS-GNTVRMWD
   WD 8  307-348    -F--------------VSTGKLTG--------HLGPVMCLTVDQMGKGQDVVITGSKDHTVKMFD
   WD 9  390-437    IK--------------KWDLASKQMQEQVERAHCDPLSSLAVVPGSS---AVVTGCKGGLLKFWH
   WD10  441-477    -L--------------RALGEVRG--------HESSVNDVCT--NSS---QLFTASDDRTVKIWQ

   WD40 Template    TG--------------ECLRTLSG--------HTSGVTSVSFSPDGK---RLVSGSEDGTIKVWD