Input parameters:

  Query = ENSDARP00000112131 (Len=444)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000112131, Len=444):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTSDEQNHLV 80  
WD40-rpts                                                                             (________

Query       81 IASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSK 160 
WD40-rpts      ________WD 1________________)           (______________WD 2_____________)       

Query      161 PDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE 240 
WD40-rpts            (_________________WD 3_________________)         (__________________WD 4__

Query      241 SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEI 320 
WD40-rpts      _______________)      (_________________WD 5_________________)(_________________

Query      321 FQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400 
WD40-rpts      __WD 6___________________)                 (_________________WD 7_______________

Query      401 VWQMAENIYNDEDPEGAADTEKYNSSNQMMISKLLECFPCGSDI 444 
WD40-rpts      __) (_________________WD 8________________) 

8 WD40-repeats found in QUERY=ENSDARP00000112131 (Len=444):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    72-109      3.06  241.21  0.03441       17.5%      7.48
  WD 2:  Seg  5   121-153      4.10  284.19  0.00918       12.5%     44.31
  WD 3:  Seg  8   167-206      6.44  380.66  0.00046       32.5%     50.46
  WD 4:  Seg 12   216-256      8.10  449.27  5.5e-05       27.5%     44.79
  WD 5:  Seg 15   263-302      7.58  427.76  0.00011       32.5%     53.66
  WD 6:  Seg 19   303-346      7.12  408.58  0.00019       27.5%     51.13
  WD 7:  Seg 23   364-403      6.16  368.92  0.00066       32.5%     55.07
  WD 8:  Seg 26   405-443      6.64  389.00  0.00036        7.5%     33.74

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   72-109    TSDE---QNHLV-----IASVQLPND-DA-Q-F-DASHYDSEKGEFGGFG
   WD 2  121-153    -----------INHEGEVNRARYMPQ-NPCI-I-ATKTPT---SDVLVFD
   WD 3  167-206    -CTP---DLRLRGHQKEGYGLSWNPNLSG-C-L-LSASDD---HTICLWD
   WD 4  216-256    IVDA---KTIFTGHTAVVEDVSWHLL-HE-S-LFGSVADD---QKLMIWD
   WD 5  263-302    -SKP---SHAVDAHTAEVNCLSFNPY-SEFI-L-ATGSAD---KTVALWD
   WD 6  303-346    LRNLKLKLHSFESHKDEIFQVQWSPH-NE-TIL-ASSGTD---RRLNVWD
   WD 7  364-403    -PEL---LFIHGGHTAKISDFSWNPN-EPWV-I-CSVSED---NIMQVWQ
   WD 8  405-443    -AEN---IYNDEDPEGAADTEKYNSS-NQ-M-M-ISKLLE---CFPCGSD

   WD40 Template    TGEC---LRTLSGHTSGVTSVSFSPD-GK-R-L-VSGSED---GTIKVWD