Input parameters:

  Query = ENSDARP00000111963 (Len=340)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000111963, Len=340):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSELDQLRQEAEQLKNQIRDARKACADATLSQITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLI 80  
WD40-rpts                                                  (_________________WD 1______________

Query       81 IWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS 160 
WD40-rpts      __)   (_________________WD 2________________)       (________________WD 3_______

Query      161 SGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240 
WD40-rpts      _________)   (_________________WD 4________________)   (_________________WD 5___

Query      241 FATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGV 320 
WD40-rpts      _____________)(___________________WD 6___________________)   (_________________W

Query      321 TDDGMAVATGSWDSFLKIWN 340 
WD40-rpts      D 7________________)

7 WD40-repeats found in QUERY=ENSDARP00000111963 (Len=340):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    45-83       9.36  501.27  1.1e-05       35.0%     48.88
  WD 2:  Seg  5    87-125      8.80  478.30  2.2e-05       15.0%     56.24
  WD 3:  Seg  9   133-170      7.64  430.40  9.8e-05       32.5%     49.54
  WD 4:  Seg 13   174-212     10.46  546.59  2.7e-06       42.5%     56.06
  WD 5:  Seg 17   216-254     10.46  546.62  2.7e-06       35.0%     53.55
  WD 6:  Seg 21   255-298      8.53  466.89  3.2e-05       32.5%     55.32
  WD 7:  Seg 25   302-340      9.75  517.43  6.6e-06       27.5%     49.52

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   45-83     -MR----TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD
   WD 2   87-125    -TN----KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN
   WD 3  133-170    -VR----VSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWD
   WD 4  174-212    -GQ----QTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWD
   WD 5  216-254    -GM----CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD
   WD 6  255-298    LRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWD
   WD 7  302-340    -AD----RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD