Input parameters:

  Query = ENSDARP00000111846 (Len=170)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000111846, Len=170):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNYFKINIQTASSFPHESSGIFEPQGWIANVRGGSFSSQGKHIKSSCSLVAFNTDHAGGGMVGLSSVNAGADGKWSVTQI 80  
WD40-rpts                (_________________________WD 1_________________________)       (______

Query       81 SCHADLVTDLDFSPFDDYLLATCSADQTVKLWRLCDVDQDQPSNAEMTLSPADGRLELLLFHPAASALLAVASAGGVQLW 160 
WD40-rpts      ___________WD 2_________________)         (_________________WD 3________________

Query      161 DITRDSALTG 170 
WD40-rpts      )         

3 WD40-repeats found in QUERY=ENSDARP00000111846 (Len=170):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    11-66       2.90  234.30  0.04247       22.5%     24.08
  WD 2:  Seg  6    74-113      7.30  416.15  0.00015       35.0%     51.85
  WD 3:  Seg 10   123-161      7.38  419.38  0.00014       22.5%     48.49

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   11-66     ASSFPHESSGIFEPQGWIANVRGGSFSS-QGKHIKSSCSLVAFNTDHAGGGMVGLSS
   WD 2   74-113    -KWS------VTQISCHADLVTDLDFSPFDDYLLAT----------CSADQTVKLWR
   WD 3  123-161    -SNA------EMTLSPADGRLELLLFHP-AASALLA----------VASAGGVQLWD

   WD40 Template    TGEC------LRTLSGHTSGVTSVSFSP-DGKRLVS----------GSEDGTIKVWD