Input parameters:

  Query = ENSDARP00000111837 (Len=256)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000111837, Len=256):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MMGLDQDQVWIGSEDSVIYIINTRSMLCHKQLTEHRGELTDFTLEKLSPESRSSRAQVYSCSADGTVIVWDVPSLKVKRQ 80  
WD40-rpts                               (____________________WD 1____________________)   (_____

Query       81 FHLSCDRLQSIQIHNGALWCVCEGARDCIMMLKPNGDQLWKIHLPDKMKATANFFNRVTLFPERQQIWTSFTDFAELCIW 160 
WD40-rpts      ____________WD 2________________)          (________________WD 3________________

Query      161 DFNDPVKPPKRLKLPNCKGVTCMIKVKKQVWIGCGGGSGLSKVVGKILVLDSESLEVEKELEAHEDSVQVLFSVEDRYVL 240 
WD40-rpts      )                                            (______________________WD 4________

Query      241 SGSAKLEGRIAIWRVD 256 
WD40-rpts      _____________)  

4 WD40-repeats found in QUERY=ENSDARP00000111837 (Len=256):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    26-71       7.88  440.30  7.2e-05       30.0%     48.98
  WD 2:  Seg  7    75-113      6.97  402.53  0.00023       10.0%     42.08
  WD 3:  Seg 12   124-161      5.41  338.01  0.00173       12.5%     36.58
  WD 4:  Seg 18   206-254      5.71  350.56  0.00117       22.5%     29.81

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   26-71     -MLCHKQLT---------EHRGELTDFTLEKLSPESRSSRAQV-Y-SCSADGTVIVWD
   WD 2   75-113    -LKVKRQFH---------LSCDRLQSIQIHN-------GALWC-V-CEGARDCIMMLK
   WD 3  124-161    LPD---KMK---------ATANFFNRVTLFP-------ERQQIWT-SFTDFAELCIWD
   WD 4  206-254    KILVL-DSESLEVEKELEAHEDSVQVLFSVE-------DRYVL-SGSAKLEGRIAIWR

   WD40 Template    TGECLRTLS---------GHTSGVTSVSFSP-------DGKRL-V-SGSEDGTIKVWD