Input parameters:

  Query = ENSDARP00000111285 (Len=551)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000111285, Len=551):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 SLIRLVMIKHGLHNVKTFLPLAGLDFTELPVTSPLCNAVLKTLENWEQLLLEKINKFDGPPPNYINTYPTDLSAGGGPAI 80  
WD40-rpts                                                                                      

Query       81 LRHKAMLEPENTPFKSKHHLSFPARRLWHFLVKQEVLQETMIRYIFTKKRKQSESIDDHVDHLIQNYVTGARKASKVEAD 160 
WD40-rpts                                                      (___________________WD 1________

Query      161 MGYPGGKAKVIHKESDIIMAFAINKANTNEIVLASTHDVQEVDVSTLVAAQPYTWIGEDFDKESRSSDDVDYRSSHTNIA 240 
WD40-rpts      ___________)                                                                    

Query      241 QASTGPFAPQQMAASSSMPWLGTGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQAG 320 
WD40-rpts                          (____________________WD 2____________________)(_____________

Query      321 NARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHSKSCGDFAFITSSSLIATAGQSNDGRNVCLWDTL 400 
WD40-rpts      ______WD 3__________________)       (__________________WD 4__________________)  

Query      401 IAPSNSMIHSFQCHENGATVLQYAPKQQLIITGGRKGFVCVFDIRQRQLLNTFQAHDSAIKALAMDSSEDFFVTGSAEGN 480 
WD40-rpts          (_________________WD 5________________)   (_________________WD 6____________

Query      481 MKVWKLAGHGLMHSFSTEHAKQSIFRNIGAGVMQIETCPGNRIFTCGADGTLKMRVLPDRYNIPASIFQIL 551 
WD40-rpts      ____)   (_____________________WD 7_____________________)               

7 WD40-repeats found in QUERY=ENSDARP00000111285 (Len=551):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   129-172      2.93  235.66  0.04075       12.5%     21.02
  WD 2:  Seg  8   261-306      7.95  443.06  6.6e-05       15.0%     50.80
  WD 3:  Seg 12   307-349      7.88  440.16  7.3e-05       15.0%     56.34
  WD 4:  Seg 16   357-398      6.92  400.50  0.00025       10.0%     52.73
  WD 5:  Seg 20   405-443      9.28  498.10  1.2e-05       20.0%     53.24
  WD 6:  Seg 24   447-485      9.57  510.01  8.3e-06       27.5%     53.17
  WD 7:  Seg 28   489-536      5.18  328.73  0.00231       22.5%     52.94

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  129-172    KR---K------QSESIDDH----------VDHLIQNYVTGARKASKVEADMGYPGG---KAKVIH
   WD 2  261-306    LG---TGQTSMGASVIMKRN----------LNNVKRMTSHPIYQYYMTGAQ----DG---SVRMFE
   WD 3  307-349    WNRPQQ------LICFRQAG----------NARVTRLYFNSQGNKCGVADG----EG---FLSLWQ
   WD 4  357-398    -P---K------PYLSWQCH----------SKSCGDFAFITSSSLIATAGQ----SNDGRNVCLWD
   WD 5  405-443    -N---S------MIHSFQCH----------ENGATVLQYAPKQQLIITGGR----KG---FVCVFD
   WD 6  447-485    -R---Q------LLNTFQAH----------DSAIKALAMDSSEDFFVTGSA----EG---NMKVWK
   WD 7  489-536    -H---G------LMHSFSTEHAKQSIFRNIGAGVMQIETCPGN-RIFTCGA----DG---TLKMRV

   WD40 Template    TG---E------CLRTLSGH----------TSGVTSVSFSPDGKRLVSGSE----DG---TIKVWD