Input parameters:

  Query = ENSDARP00000110895 (Len=649)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000110895, Len=649):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 QFSQKEMSAAGDVPAFFHNMGSSSPNQPRQKFCGMFCPVEGSSDSKTLDFDSLSSGRGGVIERQRDISKARKVEIRRSAG 80  
WD40-rpts                                                                                      

Query       81 KELLQNLNDESDRLLIKGAKIVNDDQSFCADIYMEDGLIKQIGENLIVPGGVKTIDAHGRMVMPGGIDVHTRFQMPDRGM 160 
WD40-rpts                                                                                      

Query      161 TAADDFYQGTRAALAGGTTMIVDHVVPEPGTSLISAFNQWREWADSKACCDYSLHVDITEWHKGVQEEMEALVKDHGVNS 240 
WD40-rpts                                                                                      

Query      241 FLVYLAYKDFFQLTDSQIYEVFSVIRDLGAIAQVHAENGDIIAEDEDKQMLCNEDKPEGHVLSRPEEVEAEAVNRSVTVA 320 
WD40-rpts                                                                                      

Query      321 NQTNCPLYITKVMSKSAADVIAQARKKGTVVYGEPITASIGTDGSHYWSKNWAKAAAYVTSPPLSPDPTTPDYLNSLLSC 400 
WD40-rpts                                                                                     (

Query      401 GDLQVTGSAHCTFNTSQRAVGKDDFTLIPEGTNGTEERMSIIWDKCVVTGKMDENQFVAVTSTNAAKIFNLYPRKGRIAV 480 
WD40-rpts      ___________________________________________WD 1_________________________________

Query      481 GSDADLVLWDPDVTKIISAKSHNLAVEYNIFEGMEVRGVPLVVISQGKIVLEEGTLHTTEGSGRFISRKPFPDYVYKRIK 560 
WD40-rpts      _________)                                                                      

Query      561 ARSRLAELRGVPRGLYDGPVCEVSVTPKAVTPASSAKTSPAKQPGQPVRNLHQSGFSLSGAQVDDNIPRRNTQRIVAPPG 640 
WD40-rpts                                                                                      

Query      641 GRANITSLG 649 
WD40-rpts               

1 WD40-repeats found in QUERY=ENSDARP00000110895 (Len=649):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 14   400-490      4.36  294.61  0.00665       22.5%     11.98

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  400-490    CGDLQVTGSAHCTFNTSQRAVGKDDFTLIPEGTNGTEERMSIIWDKCVVTGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADLVLWD

   WD40 Template    TGECLRTLSGHTSGV--------TSVSFSPDGKR------------------LV-------------------------SGSEDGTIKVWD