Input parameters:

  Query = ENSDARP00000110861 (Len=305)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000110861, Len=305):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSTQYSILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAA 80  
WD40-rpts          (___________________WD 1___________________)(___________________WD 2________

Query       81 SSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDG 160 
WD40-rpts      ___________)   (_________________WD 3________________)   (_________________WD 4_

Query      161 KYLASGAIDGIINIFDIATGKLLHTLEVLTLPVKSLSFHPSIILYLSIYLSIYLSIYLCLSVCLSIYLSIYCSFILSIYP 240 
WD40-rpts      _______________)   (_________________WD 5________________)   (_________________W

Query      241 SKFKSEFCSNTSQTHLNKLDTSPRECNRIIYDTHNWVWSVKYNPTGSKIVSAGDDRAIHIYDCPM 305 
WD40-rpts      D 6________________)   (_________________WD 7________________)   

7 WD40-repeats found in QUERY=ENSDARP00000110861 (Len=305):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     5-48       7.89  440.73  7.1e-05       20.0%     52.36
  WD 2:  Seg  5    49-92       9.64  513.00  7.6e-06       42.5%     55.62
  WD 3:  Seg  9    96-134      9.59  510.76  8.1e-06       25.0%     54.62
  WD 4:  Seg 13   138-176     10.13  532.96  4.1e-06       37.5%     54.54
  WD 5:  Seg 17   180-218      8.82  478.96  2.2e-05       27.5%     57.40
  WD 6:  Seg 21   222-260      8.17  452.03  5.0e-05       17.5%     57.48
  WD 7:  Seg 25   264-302      9.91  523.94  5.4e-06       32.5%     54.23

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    5-48     YS----ILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWK
   WD 2   49-92     WSDEKLELQWTLEGHQLGVVSVNISQN----GAIAASSSLDAHIRLWD
   WD 3   96-134    -G----KQIKSMDAGPVDAWTVAFSPD----SKYIATGSHLGKVNIFG
   WD 4  138-176    -G----KKEHSLDTRGKFILSIAYSPD----GKYLASGAIDGIINIFD
   WD 5  180-218    -G----KLLHTLEVLTLPVKSLSFHPS----IILYLSIYLSIYLSIYL
   WD 6  222-260    -V----CLSIYLSIYCSFILSIYPSKF----KSEFCSNTSQTHLNKLD
   WD 7  264-302    -R----ECNRIIYDTHNWVWSVKYNPT----GSKIVSAGDDRAIHIYD

   WD40 Template    TG----ECLRTLSGHTSGVTSVSFSPD----GKRLVSGSEDGTIKVWD