Input parameters:

  Query = ENSDARP00000110847 (Len=357)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000110847, Len=357):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSLYSFGLEPLSCHAWNKDRTQIAISPNSSDVHIYQMNGKEWIKIHELTEHSGRITGIDWAPESNRIVTCASDRNAYVWT 80  
WD40-rpts      (_______________WD 1_______________) (___________________WD 2__________________)

Query       81 LKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGAKLISICYFEKENDWWLSKHIKKPINSTVLSLDWHPNNMLLAAG 160 
WD40-rpts           (_________________WD 3________________)          (_______________WD 4______

Query      161 SADLHCRIFSAYIKDIEDRPGPTPWGSKMPFGELLLEYKECGGWVHSVCFSPSGDSLAWVSHNSAINVADASQGKEVTQL 240 
WD40-rpts      _________)                     (_________________WD 5________________)   (______

Query      241 TTRHLPLLSVLYVSETEIVAAGHDCCPYQFSYKGPGSLEFVKKVDIPKQSSKGNMSAMQHFRNLDKKATTEEEDTGLGSL 320 
WD40-rpts      __________WD 6________________)                                     (___________

Query      321 HQNSITQLCILEGLKAKVEKFSSVGLDGAMVVWDFKH 357 
WD40-rpts      _________WD 7____________________)   

7 WD40-repeats found in QUERY=ENSDARP00000110847 (Len=357):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-36       7.25  414.34  0.00016        5.0%     44.08
  WD 2:  Seg  5    38-80       9.41  503.40  1.0e-05       25.0%     52.05
  WD 3:  Seg  9    86-124      7.66  431.11  9.6e-05       20.0%     53.55
  WD 4:  Seg 14   135-170      7.92  441.99  6.9e-05       20.0%     47.41
  WD 5:  Seg 17   192-230      7.96  443.32  6.6e-05       37.5%     57.05
  WD 6:  Seg 21   234-271      6.40  379.17  0.00048       15.0%     55.83
  WD 7:  Seg 26   309-354      6.74  393.06  0.00031       30.0%     35.67

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-36     -------MSL--YSFGLEPLSCHA----WNKDRTQIAISPNSSDVHIYQ
   WD 2   38-80     NGKEWIKIHE--LTEHSGRITGID----WAPESNRIVTCASDRNAYVWT
   WD 3   86-124    -WK---PTLV--LVRINRAATCVK----WSPLENKFALGSGAKLISICY
   WD 4  135-170    -------KHI--KKPINSTVLSLD----WHPNNMLLAAGSADLHCRIFS
   WD 5  192-230    -GE---LLLE--YKECGGWVHSVC----FSPSGDSLAWVSHNSAINVAD
   WD 6  234-271    -GK---EVTQ--LTTRHLPLLSVL----YVSETEIVAAGH-DCCPYQFS
   WD 7  309-354    TTE---EEDTGLGSLHQNSITQLCILEGLKAKVEKFSSVGLDGAMVVWD

   WD40 Template    TGE---CLRT--LSGHTSGVTSVS----FSPDGKRLVSGSEDGTIKVWD