Input parameters:

  Query = ENSDARP00000110842 (Len=512)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000110842, Len=512):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNVGELSAAFTAVPTHKSVKKIQFANQEDKQEFSKFPTKTGRRSLSRSISQSSTDSYSSAASYTDSSDDETSPREKSQVN 80  
WD40-rpts                                                                                      

Query       81 SKGSSDFCVKNIKQAEFGRREIEIAEQDMSALISLRKRAQGEKPLAGAKVAGCTHITAQTAVLIETLVALGAQCRWTACN 160 
WD40-rpts                                                                                      

Query      161 IYSTQNEVAAALAESGVSVFAWKGESEDDFWWCIDRCVNMDGWQANMILDDGGDLTHWVYKKYPSVFKKVRGIVEESVTG 240 
WD40-rpts                    (_________________________________________WD 1____________________

Query      241 VHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLKRTTDVMFGGKQVVVCGYGEVGKGCCSALKALGAIVC 320 
WD40-rpts      _____________________)                                                          

Query      321 VTEIDPICALQACMDGFRVVKLNEVVRQMDMVITCTGNKNVVTREHLDRMKNGCIVCNMGHSNTEIDVASLRTPELTWER 400 
WD40-rpts                                                                                      

Query      401 VRSQVDHVIWPDGKRVILLAEGRLLNLSCSTVPSFVLSITATTQALALIELYNAPEGRYKQDVYLLPKKMDEYVASLHLP 480 
WD40-rpts                                                                                      

Query      481 NFDAHLTELSDEQAKYMGLNKNGPFKPNYYRY 512 
WD40-rpts                                      

1 WD40-repeats found in QUERY=ENSDARP00000110842 (Len=512):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   175-262      3.03  239.96  0.03574       22.5%     27.59

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  175-262    SGVSVFAWKGESEDDFWWCIDRCVNMDGWQANMILDDGGDLTHWVYKKYPSVFKKVRGIVEESVTGVHRLYQLSKAGKLCVPAMNVND

   WD40 Template    TGECLRTLSGHT--------------SGVTSVSFSPDG--------------KRLVSGSEDGT--------------------IKVWD