Input parameters:
Query = ENSDARP00000110219 (Len=139)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSDARP00000110219, Len=139):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTDCCFSPDDKLLVTGTSVRKDEGQGKLLFFQRETLQKLYEIEVADASVVRCLWHPKLNQIMVGTGNGLAKVYYDPVKSQ 80
WD40-rpts (_________________WD 1________________)
Query 81 RGAILCVVKSKRKEKHAETLTQDYIITREYSTHSHTLQIVISVWANVVTFNPLQLFATT 139
WD40-rpts
1 WD40-repeats found in QUERY=ENSDARP00000110219 (Len=139):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 4 36-74 4.89 316.72 0.00335 17.5% 53.11
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 36-74 LQKLYEIEVADASVVRCLWHPKLNQIMVGTGNGLAKVYY
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD