Input parameters:

  Query = ENSDARP00000110070 (Len=323)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000110070, Len=323):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPQVIEVVLPMLCNYLSYWWERGVENRTPSSSSSTCSTAVTSQHLSLVLGNILKILNSNLGIDEASWMKRIAVYAQPIIS 80  
WD40-rpts      (____________________________________________________________________________WD 

Query       81 KARADLLKSHFLPTLEKLKKKTVKVVSEEELLKADGKADTQEAELLILDEFAVLCRDLYAFYPMLIRYVDNNRSRWLKEP 160 
WD40-rpts      1___________________________________________________________________________)   

Query      161 DADSDELFRMVAEIFILWCKSHNFKREEQNFVVQNEINNLSFLTGDSKTKMAKSGGQDQERKHKKRRGDFYSIQTSLIVA 240 
WD40-rpts                                                                                      

Query      241 ALKKMLPIGLNMCTPGDQELILLAKTRYSLVQGSGVTALCACVCVCVCVCVCVCVCVCVCASLWCPLSLRIQQFSGSSTF 320 
WD40-rpts                                                                                      

Query      321 IKT 323 
WD40-rpts         

1 WD40-repeats found in QUERY=ENSDARP00000110070 (Len=323):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-157      2.95  236.56  0.03964       20.0%      3.80

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-157    MPQVIEVVLPMLCNYLSYWWERGVENRTPSSSSSTCSTAVTSQHLSLVLGNILKILNSNLGIDEASWMKRIAVYAQPIISKARADLLKSHFLPTLEKLKKKTVKVVSEEELLKADGKADTQEAELLILDEFAVLCRDLYAFYPMLIRYVDNNRSRWL

   WD40 Template    TGECL----------------------RTLSGHTSGVTSVS------------------FSPD-----------------------------GK---------RLVS---------GSE------------------------------DGTIKVWD