Input parameters:

  Query = ENSDARP00000109913 (Len=549)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000109913, Len=549):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MIGSDDGLYLFLGHTHGLSVISTSSLTCVKTWQDERVEITSISCASLGNVTHLLGTVDDMGIAQVFLHHKENTYLIKVIN 80  
WD40-rpts                                                                                      

Query       81 ETDDINQRNICVKFEVSRSGAFGAAVMMSHGSVWLDLYRFPQETWLKELEAKQATQSPRATEAKLSPVVLLMKIKPPEIP 160 
WD40-rpts                                                                                      

Query      161 AGTSLKSPFEVLQKTEEGTMIGSGQNHLISSQQWESQDLAFRKMYAKYINTSSAGPPQQKVEVPSNCTCHFLFNEGFHSV 240 
WD40-rpts                                                                                      

Query      241 PGEVKAAGDTPTSVCLWWNGSRNLLQYLLLKAPKEKDNEPRPDVLWPNSQEILCSAVSSCTRFIVLGLDNQLVTIWDRRF 320 
WD40-rpts                                   (_____________________WD 1_____________________)   

Query      321 GSPYANIVIPGDSAICRIKLLLQSEPSVNLLQGPYLPTLQLVLTCRSGTCYSVTAGQGGDTSIVALIERSADASSSVTFA 400 
WD40-rpts                                                                                      

Query      401 GPVPFLKCLALLMQRNGQVSLWEMEDGEPMFILNLPHTQVSGSLREPVCVLEPLQQKLYIVGDRKTPLAKVINREENDGS 480 
WD40-rpts                                                                                      

Query      481 LFVFSFSECSLLDQHRVVRPAVTEKVTKATILDLEEACNAYIKERADSWKETDRKLAYQWEQLLKHGIK 549 
WD40-rpts                                                                           

1 WD40-repeats found in QUERY=ENSDARP00000109913 (Len=549):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 15   270-317      3.81  271.92  0.01340       12.5%     29.20

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  270-317    LKAPKEKDNEPRPDVLWPNSQEILCSAVSSCTRFIVLGLDNQLVTIWD

   WD40 Template    TGECLRTLSGHT--------SGVTSVSFSPDGKRLVSGSEDGTIKVWD