Input parameters:

  Query = ENSDARP00000109528 (Len=605)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000109528, Len=605):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 EMAGRRVECLWKRHVVEQLKQRDRVQRQAFEEIIHQYNRLLEKSDLQVVFSERLQTEKYEQQNRHDLSSKIENCSNCNNF 80  
WD40-rpts                                                                                      

Query       81 SVLIFLQCFHNRLVLFLQLAQSVIELNNQIQQKDKEIQSNEAKMQEYLQQISQLEGECRELRNCLADLERANQTLRDEYD 160 
WD40-rpts                                                                                      

Query      161 ALQITFSALEEKLRKTTEDNQELVTRWMAEKAQEANKLNAENEKDSRRRQAKLQKELADAAKEPLPIDPDDDIEVLTEDA 240 
WD40-rpts                                                                                      

Query      241 GKATGETSPSRQLSRTPSKRLSQPPPPAGLLDSISNMFGRRRSVNSFSSSPENAEVPSACADVRVPSTALHIFDAHDGEV 320 
WD40-rpts                                    (_________________WD 1________________)___________

Query      321 NAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLT 400 
WD40-rpts      ____WD 2________________)     (_________________WD 3________________)   (_______

Query      401 GHSGKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCSMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDISYQNYHIQ 480 
WD40-rpts      __________WD 4________________)(_________________WD 5_________________)    (____

Query      481 KQLNKLCRVTSLDLNHDRTELLTCSRDDLVKIIDLRTNAVRQTFNAQGFKCGSDFTRVTFSPDGSFVAAGSADGVLYLWN 560 
WD40-rpts      _____________WD 6________________)   (___________________WD 7__________________)

Query      561 VLTGKLEKTLDKGHSSAINSVSWSLSGAFVASVEKGSKAVLWSDM 605 
WD40-rpts         (_________________WD 8_________________)  

8 WD40-repeats found in QUERY=ENSDARP00000109528 (Len=605):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   271-309      7.01  404.33  0.00022       20.0%     31.74
  WD 2:  Seg  3   307-345      8.98  485.80  1.8e-05       30.0%     49.48
  WD 3:  Seg  7   351-389      9.12  491.30  1.5e-05       30.0%     49.65
  WD 4:  Seg 11   393-431     10.28  539.48  3.3e-06       45.0%     56.17
  WD 5:  Seg 15   432-471      6.96  402.35  0.00024       15.0%     45.91
  WD 6:  Seg 19   476-514      8.30  457.64  4.2e-05       22.5%     51.91
  WD 7:  Seg 23   518-560      8.31  458.03  4.2e-05       35.0%     56.10
  WD 8:  Seg 27   564-603      8.32  458.25  4.1e-05       32.5%     50.83

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  271-309    -LDSISNM-FGRR----RSVNSFSSSPENAEVPSACADVRVPSTA
   WD 2  307-345    -STALHIF-DAHD----GEVNAVRFSPGSRLLATGGMDRRVKLWE
   WD 3  351-389    -CEPKGAL-TGSN----AGITSIEFDSAGSYLLAASNDFASRIWT
   WD 4  393-431    -YRLRHTL-TGHS----GKVLSARFLLDNARIVSGSYDRTLKLWD
   WD 5  432-471    LRSKVCSM-KTVF----AGSSCNDIVCTEQCVMSGHFDKKVRFWD
   WD 6  476-514    -NYHIQKQ-LNKL----CRVTSLDLNHDRTELLTCSRDDLVKIID
   WD 7  518-560    -NAVRQTF-NAQGFKCGSDFTRVTFSPDGSFVAAGSADGVLYLWN
   WD 8  564-603    -GKLEKTLDKGHS----SAINSVSWSLSGAFVASVEKGSKAVLWS

   WD40 Template    TGECLRTL-SGHT----SGVTSVSFSPDGKRLVSGSEDGTIKVWD