Input parameters:

  Query = ENSDARP00000109437 (Len=613)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000109437, Len=613):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKVVTCEIAWHNKEPVYSLDFQQSGDGKTQRLATAGVDTTVRMWRVDKGPDGKAVVEFLSNLARHTKAVNVVRFSPTAEV 80  
WD40-rpts       (___________________WD 1___________________)             (_______________WD 2__

Query       81 LASGGDDAAILLWKLNDNKEPEQTPTFQEEEDAQLNKESWSVVKTLRGHIEDVYDISWTSDGNFMASGSVDNTAIMWDVN 160 
WD40-rpts      _____________)                         (_________________WD 3________________)  

Query      161 KGQKMCIFNDHKSYVQGVAWDPLGQYISTLSCDRVMRVYSAHNRKKAYSISKMTSSATADGEVKNYRMFHDDSMRSFFRR 240 
WD40-rpts       (_________________WD 4________________)          (________________________WD 5_

Query      241 LTFTPDGSFLLAPAGCVEAGENVTNTTYVFSRKSFKRPIAHLPCPSKATLAVRCSPVYFELRTKRAEDDSLKPVANTFNL 320 
WD40-rpts      ______________________)                                  (__________________WD 6

Query      321 PYRLVFAVASEDSIFFYDTQQTLPFGYVSNIHYHTLSDLSWSRDGSFLAVSSTDGYCSFISFDEGELGTPLKEKPPLEMV 400 
WD40-rpts      _________________)(___________________WD 7__________________)   (_______________

Query      401 TPSSTNEKKGKRALANGRTASPVPRQANTPAAQDKEKEGSAGPASSKTSSVSGTEEKRTPQALKTKAQPRRITLNTLEGW 480 
WD40-rpts      ____WD 8__________________)(______________WD 9______________)    (______________

Query      481 GKPSTPKSPAAASSTAPSTPKSAPSTPGSSRAPLTPHTAPSTPLGPLNSKNGTTPKGPTPRRISLTPVVSKSPAAFVPPS 560 
WD40-rpts      ___WD10________________)                                                        

Query      561 STEKAKHERPSPSSDPACKPPESKRSKTDVPDGSVQSSKNKEATEITVKPKEP 613 
WD40-rpts                                                           

10 WD40-repeats found in QUERY=ENSDARP00000109437 (Len=613):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-45       6.81  395.90  0.00029       22.5%     53.12
  WD 2:  Seg  5    59-94       8.90  482.46  2.0e-05       37.5%     46.42
  WD 3:  Seg  8   120-158      9.71  515.75  7.0e-06       37.5%     55.30
  WD 4:  Seg 12   162-200      8.82  478.82  2.2e-05       25.0%     56.75
  WD 5:  Seg 17   211-263      4.79  312.36  0.00384       15.0%     27.41
  WD 6:  Seg 23   298-338      5.67  348.99  0.00123       17.5%     35.91
  WD 7:  Seg 27   339-381      7.42  421.20  0.00013       27.5%     53.92
  WD 8:  Seg 30   385-427      3.62  264.32  0.01694       15.0%      5.19
  WD 9:  Seg 33   428-461      4.78  311.94  0.00389       10.0%     13.54
  WD10:  Seg 36   466-504      6.62  388.23  0.00036       15.0%     27.85

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-45     KVVT-------------C---EIAWHNKE----PVYSLD--FQQSGDGKTQRLATAGVDTTVRMWR
   WD 2   59-94     -----------------L---SNLARHTK----AVNVVR--FSPTAE----VLASGGDDAAILLWK
   WD 3  120-158    -WSV-------------V---KTLRGHIE----DVYDIS--WTSDGN----FMASGSVDNTAIMWD
   WD 4  162-200    -GQK-------------M---CIFNDHKS----YVQGVA--WDPLGQ----YISTLSCDRVMRVYS
   WD 5  211-263    SKMTSSATADGEVKNYRM---FHDDSMRS----FFRRLT--FTPDGS----FLLAPAGCVEAGENV
   WD 6  298-338    -YFE-------------L---RTKRAEDD----SLKPVANTFNLPYR----LVFAVASEDSIFFYD
   WD 7  339-381    TQQT-------------LPFGYVSNIHYH----TLSDLS--WSRDGS----FLAVSSTDGYCSFIS
   WD 8  385-427    -GEL-------------G---TPLKEKPPLEMVTPSSTN--EKKGKR----ALANGRTASPVPRQA
   WD 9  428-461    ----------------------NTPAAQD----KEKEGS--AGPASS----KTSSVSGTEEKRTPQ
   WD10  466-504    -KAQ-------------P---RRITLNTL----EGWGKP--STPKSP----AAASSTAPSTPKSAP

   WD40 Template    TGEC-------------L---RTLSGHTS----GVTSVS--FSPDGK----RLVSGSEDGTIKVWD