Input parameters:

  Query = ENSDARP00000109369 (Len=894)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000109369, Len=894):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTAEEIINIKEAEIIKLILDFLNSRKLHISMLALEKESGIINGLYSDDMLFLRQLVLDGQWEEVLQFIQPLEGLDKFDRK 80  
WD40-rpts                                                                                      

Query       81 RFRYIILKQKFLEALCVNNAISASDDPENLELTMQDAVKCLHSLEEFCPSKEDYSKLCLLLTLPRLTNHAEFKDWNPSTA 160 
WD40-rpts                                                                                      

Query      161 RVHCFEEACTMVAEFIPADRKLSEAGFKASGDRLFQLLIKGILYECCVEFCQSKATGEEISEEEVLLAVDVLCGNGCEEL 240 
WD40-rpts                                                                                      

Query      241 DLSLLSWLQNLSSTVFACAFEQKTLNIHVDRLVKPARTGHADLLTPLLTKLSPCPASPLRRPHSADTYMSRSLNPALDGL 320 
WD40-rpts                                                                                      

Query      321 SHGLVGREKKNTEGDGKATAMSQSFANFGYPSGGNGSKNGSTVCTDSPDSVKKSLDSLISCQNPLAPEHRLRQSTALVEQ 400 
WD40-rpts                                                                                      

Query      401 TRYVLHSLLAKMEESQLQLTNEQLQEFQRQRLRVQQHLEQKQQQRQLYHQMLLEGGVHPPDQPTDTAQHNLTQKFLNRSI 480 
WD40-rpts                                             (________________WD 1________________)   

Query      481 QKLEELNVGMEDLGEDVQALAQQCNGTSASESSKQTPETGPGRIKTAVISSTPHKGGVRGIPSLDESPVLVNQRFPNILT 560 
WD40-rpts             (______________WD 2______________)   (_________________WD 3______________

Query      561 LVFQDEKPKSPFIAVQTLEDTQAVRAVAFHPSGMLYAIGSNSKTLRVCTYPQSLKTSPQAPVKQPDICFKRIKHHKGSIY 640 
WD40-rpts      __)(____________________WD 4____________________)                   (___________

Query      641 CVAWSPCGQLLATGSNDKYVKVLPFNADTCNIAGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRG 720 
WD40-rpts      ____WD 5_______________)        (___________________WD 6___________________)   (

Query      721 QGLHALSGHTGHILSLYTWGGWMIASGSQDKTVRFWDLRVPSCVKVVGTTLHGTGSAVASVAIDPSGRLMATGLEDCRCM 800 
WD40-rpts      ________________WD 7________________)         (________________WD 8_____________

Query      801 LYDIRGGRSVQVYRPHSSDVRSVRFSPGAHYLLTGSYDSRVMISDLQGDLTKNLPVTVVAEHADKVIQCRWHTRDLSFLS 880 
WD40-rpts      __)   (_________________WD 9________________)       (_________________WD10______

Query      881 SSADKTVTLWAHQT 894 
WD40-rpts      __________)   

10 WD40-repeats found in QUERY=ENSDARP00000109369 (Len=894):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   440-477      4.67  307.37  0.00448       12.5%     30.95
  WD 2:  Seg  7   488-521      4.40  296.52  0.00627       15.0%     22.63
  WD 3:  Seg  8   525-563      7.16  410.34  0.00018       12.5%     45.81
  WD 4:  Seg 12   564-609      7.61  429.02  0.00010       27.5%     42.73
  WD 5:  Seg 16   629-664      8.64  471.55  2.7e-05       27.5%     48.27
  WD 6:  Seg 19   673-716      5.68  349.11  0.00123       20.0%     43.04
  WD 7:  Seg 23   720-757      8.93  483.73  1.9e-05       40.0%     52.64
  WD 8:  Seg 28   767-803      8.85  480.13  2.1e-05       35.0%     45.77
  WD 9:  Seg 31   807-845      9.61  511.52  7.9e-06       35.0%     56.67
  WD10:  Seg 35   853-891      7.77  435.51  8.4e-05       17.5%     49.15

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  440-477    -QKQQQR------QLYHQMLLEGGVH-----PPDQP-TDTAQHNLTQKFLN
   WD 2  488-521    VG-----------MEDLGEDVQALAQ-----QCNGT-SASESSKQTPETGP
   WD 3  525-563    -KTAVIS------STPHKGGVRGIPS-----LDESPVLVNQRFPNILTLVF
   WD 4  564-609    QDEKPKSPFIAVQTLEDTQAVRAVAF-----HPSGMLYAIGSNSKTLRVCT
   WD 5  629-664    ----FKR------IKHHKGSIYCVAW-----SPCGQLLATGSNDKYVKVLP
   WD 6  673-716    -AGPDLE------FSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTD
   WD 7  720-757    -GQGLHA------LSGHTGHILSL-Y-----TWGGWMIASGSQDKTVRFWD
   WD 8  767-803    VG---TT------LHGTGSAVASVAI-----DPSGRLMATGLEDCRCMLYD
   WD 9  807-845    -GRSVQV------YRPHSSDVRSVRF-----SPGAHYLLTGSYDSRVMISD
   WD10  853-891    -NLPVTV------VAEHADKVIQCRW-----HTRDLSFLSSSADKTVTLWA

   WD40 Template    TGECLRT------LSGHTSGVTSVSF-----SPDGKRLVSGSEDGTIKVWD