Input parameters:

  Query = ENSDARP00000109120 (Len=535)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000109120, Len=535):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 RRVEEKDNMSRYDSDGDKSDDLVVDVSNEDPATPRVSPSHSPPENGLDKARALKKDAPNSPASVASSGSTPSSKAKDHPH 80  
WD40-rpts                                                                                      

Query       81 NDKSSTPGLKSNTPTPRNDAPTPGTSNTPGLRPHPGKPPGMEALTAPALRTPLSIAPPYGTPFMMGHHPEMNGSLTSPGV 160 
WD40-rpts                                                                                      

Query      161 YPGLHISPQMSAAAAAAYGRTHMPGFDPHPHMRAPVLPASLTSIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHA 240 
WD40-rpts                                                                            (_________

Query      241 RQINTLSHGEVVCAVTISNPTRHVYTGGKGCVKIWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLT 320 
WD40-rpts      ___________WD 1____________________)(_____________________WD 2__________________

Query      321 IWDLASQTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISHDGTKLWTGG 400 
WD40-rpts      __)     (_________________WD 3________________)   (_________________WD 4________

Query      401 LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLSLKFAYCGKWFVS 480 
WD40-rpts      ________)(__________________WD 5_________________)  (_________________WD 6______

Query      481 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 535 
WD40-rpts      __________)(__________________WD 7_________________)   

7 WD40-repeats found in QUERY=ENSDARP00000109120 (Len=535):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   231-276      6.28  374.20  0.00056       22.5%     50.12
  WD 2:  Seg 11   277-323      7.90  440.89  7.1e-05       25.0%     49.34
  WD 3:  Seg 14   329-367      8.94  484.13  1.9e-05       30.0%     56.01
  WD 4:  Seg 18   371-409     10.09  531.29  4.3e-06       35.0%     54.85
  WD 5:  Seg 22   410-450      7.39  419.89  0.00014       25.0%     53.33
  WD 6:  Seg 26   453-491      8.73  475.15  2.5e-05       30.0%     54.26
  WD 7:  Seg 30   492-532      7.84  438.64  7.6e-05       32.5%     54.55

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  231-276    LIG-------PGIPRHARQINTL-SHGEVVCAVTISNPTRHVYTGG-KGCVKIWD
   WD 2  277-323    ISQPGSKSPVS-------QLDCL-NRDNYIRSCKLLPDGRTLIVGGEASTLTIWD
   WD 3  329-367    -PR-------I-------KAELT-SSAPACYALAISPDAKVCFSCCSDGNIAVWD
   WD 4  371-409    -QT-------L-------VRQFQ-GHTDGASCIDISHDGTKLWTGGLDNTVRSWD
   WD 5  410-450    LRE-------G-------RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLH
   WD 6  453-491    -KP-------D-------KYQLH-LHESCVLSLKFAYCGKWFVSTGKDNLLNAWR
   WD 7  492-532    TPY------GA-------SIFQS-KESSSVLSCDISADDKYIVTGSGDKKATVYE

   WD40 Template    TGE-------C-------LRTLS-GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD