Input parameters:

  Query = ENSDARP00000109006 (Len=407)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000109006, Len=407):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAGVRALGSLSRLTTSRYTLFPGVTRRTFKFAACMMARTHVSYEVKGDVAVVRMNDPTAKVNTLSVQMQKDMTEVMDEVW 80  
WD40-rpts                                                    (____________________________WD 1_

Query       81 GNSAVQSVVLISSKPGCFIAGADISMIKACKTAEEVTGLSQEGQRMFEKIEKSPKPIVAAINGSCLGGGLEFVIACQYRI 160 
WD40-rpts      ___________________________)                                                    

Query      161 ATKSKKTVLGCPEVMLGLLPGAGGTQRLPKMLGLPSAFDVMLTGRSIRADKAKKMGLVHQLVDTLGPGLKSPEERTIEYL 240 
WD40-rpts                                                                                      

Query      241 EEVAVEAARGLAQKKITLTKEKGWMQKIQDYVMSYPFVRQQIYNTVEKKVMKQTKGLYPAPLKIIESVKAGVEQGPTTGY 320 
WD40-rpts                                                                                      

Query      321 LVESQQFGKLAMTNESKALIGLYHGQVACKKNRFGTPEKEVKTLAILGAGLMGAGIAQVTVDKGIHTILKDTTVDGLSRG 400 
WD40-rpts                                                                                      

Query      401 EQQVFKG 407 
WD40-rpts             

1 WD40-repeats found in QUERY=ENSDARP00000109006 (Len=407):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    47-108      3.25  248.88  0.02722       17.5%     14.89

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   47-108    GDVAVVRMNDPTAKVNTLSVQMQKDMTEVMDEVWGNSAVQSVVLISSKPGCFIAGADISMIK

   WD40 Template    TGECLRTLSGHTSGVTSVS-----------------FSPDGKRLVSGSEDGTIKVWD-----