Input parameters:

  Query = ENSDARP00000108688 (Len=679)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000108688, Len=679):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAEGRRLDRDDDLPVYLARPSTADPVARQKYGGLFCNVEGAYESKTIDFDALSVGQRGSRSPRATNREEQKPSKQQTNFT 80  
WD40-rpts                                                                                      

Query       81 ALQSGGETEDKTQSAFEREDLQPTVTKGLPSSIDPTLSETYQSSERLLIKGGRIVNDDQSFYADIYMEDGVIKQIGDNLI 160 
WD40-rpts                                                                                      

Query      161 VPGGVKTIEANGKMVIPGGIDIHTHLQMPFRGTTTADDFTQGTKAALAGGTTMIVDHVIPEPGCSLLEAFDRWSKWADEK 240 
WD40-rpts                                                                                      

Query      241 ACCDYSLHVDITHWNDSVKQEVETLIKEKGVNSFQVYMAFKDLYQMSNTELYEVFTFLGEHGGIAQVHAENGEIIAEEQA 320 
WD40-rpts                                                                                      

Query      321 RMLEMGITGPEGHVLSRPEELEAEAVFRAVTIASQTNCPLYVTRVMSKSAADIISQARKKGNVVFGEPITASLGTDGTHY 400 
WD40-rpts                                                                                      

Query      401 WSKNWAKAASFVTSPPLSPDPTTPDYLNTLLASGDLSVVGSAHCTFSVAQKAIGKDDFTQIPEGVNGAEERMSIIWDKAV 480 
WD40-rpts                                      (___________________________________________WD 1

Query      481 VTGKMDENMFVAVTSTNAAKILNLYPRKGRIAVGSDSDLVIWDTDAVRTITAKTHHSAAEYNVFEGMELRGAPMLVVCQG 560 
WD40-rpts      __________________________________________)                                     

Query      561 KIVLEDGNLHATSGTGRFIPCSPFPDFAYKRVKARKQLAILKAVPRGMYDGPVSEFSPMSRGGTPSASTRTSPTKVPVRN 640 
WD40-rpts                                                                                      

Query      641 LHQSGFTLSGISPEEAPIRPAGRRIVVPPGGRSNITSLS 679 
WD40-rpts                                             

1 WD40-repeats found in QUERY=ENSDARP00000108688 (Len=679):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 15   433-523      4.32  293.00  0.00699       20.0%     13.44

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  433-523    SGDLSVVGSAHCTFSVAQKAIGKDDFTQIPEGVNGAEERMSIIWDKAVVTGKMDENMFVAVTSTNAAKILNLYPRKGRIAVGSDSDLVIWD

   WD40 Template    TGECLRTLSGHTSGV--------TSVSFSPDGKR------------------LV-------------------------SGSEDGTIKVWD