Input parameters:

  Query = ENSDARP00000108468 (Len=510)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000108468, Len=510):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTEDVQKHSVHTLVFRSLKRTHDMFVADHAKPIAQDEQSFKVKMAAKMRAEYKAVLHMPVLKEGREKGSLHTSDPYGQSA 80  
WD40-rpts                              (_________________WD 1_________________)   (____________

Query       81 YPLPDTTPEYLVTGTHPYPSAPGVALTADTQMLKMPSEMGVHSMALALPPSQARQEASRTAASVAEIHRHAGGAERSHPP 160 
WD40-rpts      _____WD 2________________)                                    (________________W

Query      161 QHALSLMEGGTRTLVPRKAPTMPKPQWHPPWKLYRVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLT 240 
WD40-rpts      D 3_______________)           (_________________WD 4________________)   (_______

Query      241 GHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANV 320 
WD40-rpts      __________WD 5________________)   (_________________WD 6________________)   (___

Query      321 HTLSGHTNTVATVKCQSAEPQVVTGSHDTTIRLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPDNIKQWKFPDG 400 
WD40-rpts      ______________WD 7________________)   (________________WD 8________________)   (

Query      401 NFIQNLSGHNAIINTLASILMVLVSGADNGTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSCVFDQSESRLITAEADK 480 
WD40-rpts      ________________WD 9_______________)           (_________________WD10___________

Query      481 TIKVYKEDDTATEESHPVNWKPEILKRKRF 510 
WD40-rpts      _____)                        

10 WD40-repeats found in QUERY=ENSDARP00000108468 (Len=510):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    25-64       7.19  411.48  0.00018        2.5%     29.64
  WD 2:  Seg  6    68-106      4.38  295.59  0.00645       10.0%      4.37
  WD 3:  Seg 13   143-179      4.24  289.61  0.00776       10.0%     20.11
  WD 4:  Seg 17   191-229      9.60  511.02  8.1e-06       40.0%     53.02
  WD 5:  Seg 21   233-271      9.61  511.83  7.9e-06       37.5%     55.79
  WD 6:  Seg 25   275-313      9.54  508.83  8.6e-06       35.0%     54.33
  WD 7:  Seg 29   317-355      9.96  526.25  5.0e-06       40.0%     53.76
  WD 8:  Seg 33   359-396      7.97  443.92  6.5e-05       32.5%     53.05
  WD 9:  Seg 37   400-436      7.58  427.76  0.00011       35.0%     52.83
  WD10:  Seg 42   448-486      8.06  447.65  5.8e-05       27.5%     38.70

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   25-64     FVADHAKPIAQDEQSFKVKMAAKMRAEYKAVLHMPVLKEG
   WD 2   68-106    -GSLHTSDPYGQSAYPLPDTTPEYLVTGTHPYPSAPGVAL
   WD 3  143-179    S---VAEIHRHAGGAERSHPPQHALSLMEGGTRTLVPRKA
   WD 4  191-229    -WKLYRVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWD
   WD 5  233-271    -GKLKLSLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWD
   WD 6  275-313    -NKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWD
   WD 7  317-355    -KANVHTLSGHTNTVATVKCQSAEPQVVTGSHDTTIRLWD
   WD 8  359-396    -GKTRATLTNHKKSVRALVLHPRQYTFASGSPD-NIKQWK
   WD 9  400-436    -GNFIQNLSGHNAIINTLAS--ILMVLVSGADNGTIHMWD
   WD10  448-486    -AAVQPGSLDSESGIFSCVFDQSESRLITAEADKTIKVYK

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD