Input parameters:

  Query = ENSDARP00000108411 (Len=1813)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000108411, Len=1813):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MMKNKSKKQEDEGSTQSNASSNSASEESNRSGSESGSQSESEQGSEKAQSRHSESNSTSDSESHSESGSESNGSKSHQSS 80  
WD40-rpts                                                                                      

Query       81 AQVKDKPVRKKDNLADVKKMWEEHPDVYGVRRSSRSRQEPARLNIGAEGSSDSEGESSKRKSSRQKKKENTWKDDDSNDE 160 
WD40-rpts                                                                                      

Query      161 EDVEEETSSSESEQEEKKVRSRRLPARRPQTKSSASKQSQKGRKQRKQESSDEDDDDDDDDEEDTPKRQTRRRAATKVSY 240 
WD40-rpts                                                                                      

Query      241 KEDQNDFETDSDDLIEMAEGAEEQQDDDSETIEKVVDTRTGKKGATGASTTLYAIEENGDPGADFDPEKEEGETQFLIKW 320 
WD40-rpts                                                                                      

Query      321 KGWSYIHNTWESVDSLTQQKVKGMKKLENFKKKNEELNAWLKKASPEDLEYYNCQQELTNDLSKQFQIIERVIATRTGKS 400 
WD40-rpts                                                                                      

Query      401 QATSDTPSHKSSSGEPEYLCKWMGLPYAECTWEDSALIKKKFQACIDSFHNRNSSKTVPSKDCKVLKQRPRFVPLKKQPS 480 
WD40-rpts                                                                                      

Query      481 YIGDENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFIVVVPLSTLTSWQREFDTW 560 
WD40-rpts                                                                                      

Query      561 APDMNVVVYLGDVTSRKTIRDYEWINPQTKRIKFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLID 640 
WD40-rpts                                                                                      

Query      641 FRSNHRLLITGTPLQNSLKELWSLLHFLMSDKFESWEDFEDEHGKGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQ 720 
WD40-rpts                                                                                      

Query      721 ILRVDMSAQQKQFYKWILTRNFKALSKGTRGSSSGFLNIVMELKKCCNHAFLIKQPEDGENDAPQEHLQSLVRGGGKLVL 800 
WD40-rpts                                                                                      

Query      801 LDKLLTRLKDRGNRVLIFSQMVRMLDILADYLSMKRYQFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 880 
WD40-rpts                                        (__________________________WD 1_______________

Query      881 LASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDNSS 960 
WD40-rpts      __________)                                                                     

Query      961 ANSNSNPFNKEELSAILKFGAEDLFKEAEGEESEPQEMDIDEILRLAETRESDQGSSATDELLSQFKVANFTMDESTPDL 1040
WD40-rpts                                                                                      

Query     1041 DEKPGRDWDEIIPEEQRRKVEEEQKQKEMEDIYMLPRSRSSNKKAQANDSDSDVGSKLKHRSSGSDSETDDSEDDKRPKR 1120
WD40-rpts                                                                                      

Query     1121 RGRPRARKNNVEGFTDAEIRRFIKAYKKFGAPLERLEAIARDSELVEKSIADLKRLGELVHNSCVTAVQEHEEHLKENPV 1200
WD40-rpts                                                                                      

Query     1201 EAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPSNPAERNKFQLTCRVKTPHFDVDWDIHDDTQLLLGIYEHG 1280
WD40-rpts                                                                                      

Query     1281 YGNWDLIKTDPDLKLSEKILLDDPEKKPQGKQLQMRTDYLLKMLKKDLESQDAIKAGDEPKIKKRKPRMKKKAPSNELVN 1360
WD40-rpts                                                                                      

Query     1361 EIASPRLSDNPSEEGEVKDDGAEKTPTKKKQKKDNKENKEKTGTPKKEKEGDKDKKRSKPKKEKAKPAGKGKKAQGPVHI 1440
WD40-rpts                                                                                      

Query     1441 TQGSEPIPIGEEDDELDQETFSICKERMRPVKKALKQLDKPDEGLSVQDQLQHTRTCLLKIGDRITECLKSYSDPEHIKI 1520
WD40-rpts                                                                                      

Query     1521 WRRNLWIFVSKFTEFGAQKLHRLYKKAQKKRSQEGEKEHKKKDDPIKKKPFRPEPSGSSRDSTGAQPTTKPHPPVSHQSG 1600
WD40-rpts                                                                                      

Query     1601 PPHPPHHREQYNQHNKRHFPNDDRGDWQRDRKYGYPGNSNQPWQGDRHHPYEPHRYKDHHYSDRRPHGDYRSSGGYRNSG 1680
WD40-rpts                                                                                      

Query     1681 SPRKRPYDQYGNDRDHRGHRDYYDRHPDPKRRRSDEYRSPNYHQGGGGGGGGGGGGGHPQDFRRMPDHRGPPGNHGPMGP 1760
WD40-rpts                                                                                      

Query     1761 DHYRPFHPDKPPPLIDPRSPQSQKSPLEPISPGMDRSAEQKSATDFNWNNRKT 1813
WD40-rpts                                                           

1 WD40-repeats found in QUERY=ENSDARP00000108411 (Len=1813):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 11   835-891      2.81  230.71  0.04736       20.0%     31.38

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  835-891    KRYQFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASAD-TVVIFD

   WD40 Template    TGECLRTLSGHTS------------------GVTSVSFSPDGKRLVSGSEDGTIKVWD