Input parameters:

  Query = ENSDARP00000108099 (Len=893)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000108099, Len=893):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSANKKGSVIFSGFRALGLYSNHLAHVVRFHKKHREFYVVTAVGQCFHTYNVKKLGIVAVSNALPEDISSVTADCMLVYA 80  
WD40-rpts                                                         (_________________WD 1_______

Query       81 AYGKLISAFARSREVVHTYTGHQADVHLLLPFGNHLISVDKDNVVIIWDVESEDTYLQISYDKASFEVSALMHPSTYLNK 160 
WD40-rpts      _________)  (________________WD 2_______________)   (__________________WD 3_____

Query      161 ILFGSSQGSLQLWNIKSNKLLFTFSGWSAAVTVLQQTPAVDVVGVGLASGQIIIHNIKFDETLMKFQQDWGPITALSFRT 240 
WD40-rpts      _____________)   (_________________WD 4________________)   (_________________WD 

Query      241 DGHPIMASGSPIGHIGLWDLEEKKLVSQMRDAHTTAIAGLTFLQNEPLLITNGADNAIRVWIFDVAGGDGRLLRQRMGHS 320 
WD40-rpts      5_________________)(___________________WD 6__________________)       (__________

Query      321 APPTKIRHYDQSGLNILSAGQDGTLQSFSTVHERFNKSLGHGTLNKAKAKKKGVKYDTAKLPSITTFASETARQSDWDGI 400 
WD40-rpts      _______WD 7_________________)            (_________________WD 8________________)

Query      401 IACHRGFLMTTSWNYQKGSMGAHKLEPERFNRNRSLNVHATAVDISSCGNFAVIALSSGHIDVYNMQSGLHRGHYGEDKA 480 
WD40-rpts                                (_________________WD 9________________)(______________

Query      481 HEGPVRGVAVDALNQLTFSVGADHLLKIWKFKSKEHLHTHRLPAAPASSLLHRDSGMLAIALDVFAIHILDVETRRIVRK 560 
WD40-rpts      ______WD10___________________)   (________________WD11________________)   (_____

Query      561 FSGHRGQINDMTFSPDGRWLITASMDCTIRTWDLPSGSLVDCFLVEAAAVSVSLSPTGNFLASSHVDGLGVYLWSNNTLC 640 
WD40-rpts      ____________WD12________________)   (_________________WD13________________)   (_

Query      641 SLVSLRPLPADYEPTVIMLPGNCPSKDTEEEEVLDSDSSEMAEYISPAQLDEHLVTLSLLPDSRWKNLLHLDIIKKKNKP 720 
WD40-rpts      ________________WD14________________)                                           

Query      721 KEPPKVPKAAPFFIPTIPGLVPQFSLPNTPSEAQSKVVNLGVLAQKSNFYIELENAIESNSYEEPVKLLRELGPSAIETE 800 
WD40-rpts                                                                                      

Query      801 LRALSPDMGGDVGVMKSFLKMISCILKSKKDFDLAQAYLALFLKLHLRLISDEPELMEEAERVSAQLEETWMCIQTLLNQ 880 
WD40-rpts                                                                                      

Query      881 SICLLSYIKSALL 893 
WD40-rpts                   

14 WD40-repeats found in QUERY=ENSDARP00000108099 (Len=893):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6    52-90       2.77  228.95  0.04995       12.5%     31.73
  WD 2:  Seg 10    93-129      6.31  375.35  0.00054       30.0%     52.38
  WD 3:  Seg 14   133-174      5.24  331.30  0.00213       15.0%     57.46
  WD 4:  Seg 18   178-216      7.35  418.44  0.00014       25.0%     59.93
  WD 5:  Seg 22   220-259      7.24  413.75  0.00017       35.0%     56.60
  WD 6:  Seg 26   260-302      7.35  418.24  0.00014       22.5%     53.97
  WD 7:  Seg 30   310-349      7.02  404.51  0.00022       27.5%     51.81
  WD 8:  Seg 35   362-400      3.03  239.86  0.03586        7.5%     35.92
  WD 9:  Seg 40   427-465      6.19  370.22  0.00064       22.5%     48.96
  WD10:  Seg 43   466-510      6.72  392.35  0.00032       20.0%     48.18
  WD11:  Seg 47   514-551      5.01  321.56  0.00288       20.0%     53.28
  WD12:  Seg 51   555-593      9.82  520.41  6.0e-06       40.0%     57.27
  WD13:  Seg 55   597-635      5.34  335.16  0.00189       32.5%     53.88
  WD14:  Seg 59   639-677      5.33  334.98  0.00190       12.5%     48.67

Multiple sequence alignment of 14 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   52-90     -VK---KLG-----IVAVSNALPEDIS-S---VTADC-MLVYAAYGKL-ISAFA
   WD 2   93-129    -RE---VVH-----TYTGHQADVHL---L---LPFGN-HLISVDKDNV-VIIWD
   WD 3  133-174    -ED---TYL-----QISYDKASFEVSA-LMHPSTYLN-KILFGSSQGS-LQLWN
   WD 4  178-216    -NK---LLF-----TFSGWSAAVTVLQ-Q---TPAVD-VVGVGLASGQ-IIIHN
   WD 5  220-259    -DE---TLM-----KFQQDWGPITALS-F---RTDGHPIMASGSPIGH-IGLWD
   WD 6  260-302    LEEKKLVSQ-----MRDAHTTAIAGLT-F---LQNEP-LLITNGADNA-IRVWI
   WD 7  310-349    -GR---LLR-----QRMGHSAPPTKIRHY---DQSGL-NILSAGQDGT-LQSFS
   WD 8  362-400    -GT---LNK-----AKAKKKGVKYDTA-K---LPSIT-TFASETARQS-DWDGI
   WD 9  427-465    -PE---RFN-----RNRSLNVHATAVD-I---SSCGN-FAVIALSSGH-IDVYN
   WD10  466-510    MQS---GLHRGHYGEDKAHEGPVRGVA-V---DALNQ-LTFSVGADHL-LKIWK
   WD11  514-551    -KE---HLH-----THRLPAA-PASSL-L---HRDSG-MLAIALDVFA-IHILD
   WD12  555-593    -RR---IVR-----KFSGHRGQINDMT-F---SPDGR-WLITASMDCT-IRTWD
   WD13  597-635    -GS---LVD-----CFLVEAAAV-SVS-L---SPTGN-FLASSHVDGLGVYLWS
   WD14  639-677    -LC---SLV-----SLRPLPADYEPTV-I---MLPGN-CPSKDTEEEE-VLDSD

   WD40 Template    TGE---CLR-----TLSGHTSGVTSVS-F---SPDGK-RLVSGSEDGT-IKVWD