Input parameters:

  Query = ENSDARP00000107025 (Len=2047)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000107025, Len=2047):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADEEAEQERSARSDTSSALQALATRLQEIRGALEDRAEPAEESASQYCYQFCQTLLEYASLWRIEDEPLPVLEVYITAL 80  
WD40-rpts                                                                                      

Query       81 LSFAQACPLLSAQCEEVPLLLERLSLSCAELLLSLPRNIPDALWDRFRTSVQIAHPLVQEKGISHLTILSTIAREQGVWS 160 
WD40-rpts                                                                  (___________________

Query      161 NPTLQAILSSETPAGEEVHEFLKAEGPTLLRMRLKQLMKEGRADQAAALAKACADLSQFEEKGHFKQMHLVCLCTVAPQD 240 
WD40-rpts      _____________________________________________________________WD 1_______________

Query      241 VVMEELSKVDCRDALEMICNLEADGEEKAAFTLCSAFLTRQILQEDSYCAWELTLFWGNLLKRLEPSEQGFLDRCRQMSF 320 
WD40-rpts      ________________________________________________________________)               

Query      321 LSKTVFHLLFFIKFIQTEMGKVGLPTCVEICIRALRLDSCEGSTKATVCKTISCLLPSDLEVKRACQLTEFLLEPTVDSY 400 
WD40-rpts                                                                                      

Query      401 YAVETLYNEPDQKLDVEDLLVSNSLRCELLLVLKTQWPFDPEYWNWKALKRHCLGLMGEEASIVSSIDELNDGDLEGLGE 480 
WD40-rpts                                                                                      

Query      481 FNEDFKDMSQCFLDTTNELNDMADQKQKNREMKKLREKGFVSARFRNWQAYMQYCVLCDKEFLGHRIVRHAVTHFKDGSY 560 
WD40-rpts                                                                                      

Query      561 FCPICLETFETKETLEPHVASHVKLSCKERLAAMKTSKQLASPKTATPDIPSLKAKSSENQVRKPKTKSSSGGQANKLSS 640 
WD40-rpts                                                                                      

Query      641 KGSNDSEGFGGEGNTCPVQYCRKGFKYFRNLIAHVKDHGDNEEAKRFLEMQSTKIVCQYCRRQFVSVDHLNDHLQMHCGI 720 
WD40-rpts                                                                                      

Query      721 KPYICIQLNCKASFNSNTELIVHKKEHTVFKARCMFPGCGKIFHEAYKLYDHEAQHYKTFTCKAPDCGKVFHSQSELDLH 800 
WD40-rpts                                                                                      

Query      801 AESHITKVESKNTESQSIEPAEPHPEQCNQTEQDSAQPDPLSVMDLNDRGAESEEDRQSGMVIVKHSVENMLNSEFAVSA 880 
WD40-rpts                                                                                      

Query      881 DCVQPGTSKPDQLPTHQHIPQINDHPGKSTEGTRASRLKPHRQEESLLEALMSNSDPMPSTSSYQSVLEDLLPVPATNGQ 960 
WD40-rpts                                                                                      

Query      961 LQSADSASTTPLYNNGVFRQYNPNPVTPSQASYQSLHSSRRTPPPQAAHNATPLVSLGQMLPPVSQTLPLQMASVPNDGQ 1040
WD40-rpts                                                                                      

Query     1041 VLENKCVKPIDTTIVQVKERHKCPHETCTRDYSSYRSVTKHMKAVHPDFYTQWKLAKKNNVAGRSKHRSVNGGHSSVVTP 1120
WD40-rpts                                                                                      

Query     1121 RDQPAQRRPAVQTQKSLSQPTCYPSNCANPKYPSVSSHIAASPGHIRSNEMDNILDPIVLSQLGNGNNQPQMATDHLWDP 1200
WD40-rpts                                                                                      

Query     1201 RNNSVLQQQRCHSMTQSMNTLSSSHFTHMNPASNDDAQQRGTSYTTLQSKRNGYPVPARADINQKLSNTSNDDLHAVGEL 1280
WD40-rpts                                                                                      

Query     1281 NSTQVMGPNAVVTAQSSAETNLGSAQMSVLSSYADTMNSSVPKESSAAYLPQAEDSFPPVPSAQCLVKLERETTVGFPLS 1360
WD40-rpts                                                                                      

Query     1361 NNAPPSNGSSPSSQDNTGNASSDGEHKKVKRNRRTKWPAIVKDGKFICCRCYREFNSPKSLGGHLSKRAYCKPFEEADLT 1440
WD40-rpts                                                                                      

Query     1441 ADLPSSFLDLLNSPHPAPSSHVTLPQIKGPLDPKLYPNVTFPQANGTYTSIDKQMGGTFKQSQSSPCAGSAQEQQMVPNP 1520
WD40-rpts                                                                                      

Query     1521 CGSYAQSSRLSETSVIQHTGSVKHQLQPSYSEMSSTLFNDSVSDPLLTQLLADDRSTSSLNSSSSDQVFQNETLNRMKDN 1600
WD40-rpts                                                                                      

Query     1601 KEKTPNINVSDLSNDGLLAAMANFTQNMVSEKSVKERLREQILAGEFHKKSSLPRGSSVDSSSSQMSVSSPVSGDLQRTS 1680
WD40-rpts                                                                                      

Query     1681 NLVTNTPQSEQQPNVNASDVLVETVSQMSPNDGLNHTMSSVLPEGAVNDQPSNIPITSVDEVLEIQKALEKLDLDREISE 1760
WD40-rpts                                                                                      

Query     1761 VIRTVDDPAVIPVQPTKPELKPTKPKVLPTVKASYVKPFVCDVKGCTYSAMTKDALMKHLVKTHNYTEDMLAQMKDQFNV 1840
WD40-rpts                                                                                      

Query     1841 APFRCQKCSKAFTRNSNLKAHYISIHNYSQEEVKKMKIRPQSSQRLLESDKGSPCSVPEVPRTVKNTPVVDARQPPKDVT 1920
WD40-rpts                                                                                      

Query     1921 CPSGSMRQDTVKTPHCIPPPFVPQSAFVPQSRSLAAGTPTVNQMAVQPSVIMSSHSSVTQRIDQNANGWFPTPTPVPAQA 2000
WD40-rpts                                                                                      

Query     2001 QLSPLKEILPIAPFTQNPSALLHKVNLPLDKKPKPSKPKVAKPKESP 2047
WD40-rpts                                                     

1 WD40-repeats found in QUERY=ENSDARP00000107025 (Len=2047):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   141-305      3.08  241.95  0.03364       25.0%      5.27

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  141-305    KGISHLTILSTIAREQGVWSNPTLQAILSSETPAGEEVHEFLKAEGPTLLRMRLKQLMKEGRADQAAALAKACADLSQFEEKGHFKQMHLVCLCTVAPQDVVMEELSKVDCRDALEMICNLEADGEEKAAFTLCSAFLTRQILQEDSYCAWELTLFWGNLLKRLE

   WD40 Template    TGECLRTL-------SGHTS--------GVTSVS--------------------------------------------------F-----------SP-----------DG--------KRLVSGSED-----------------GTIKVW-------------D