Input parameters:

  Query = ENSDARP00000106816 (Len=2226)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000106816, Len=2226):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASLVLEDGTTFKGRLFGAVSSVSGEVVFQTGMVGYPEALTDPSYKSQILTLTYPMIGNYGIPKDEDGEFGLSKWFESSQ 80  
WD40-rpts                                                                                      

Query       81 IHAAALIVGEVSENPSHWSAAKSLDEWLREQGIPGLQGVDTRCLTKKIREKGTMLGKLVVEGTPADNIPFDNPDARNLVK 160 
WD40-rpts                                                                                      

Query      161 EVSMKAPKVFNPEGTVRITAIDCGIKYNQIRCLCQRGARVTVVPWDQPLDSNDFDGLFISNGPGNPEYCKETVENIRKVA 240 
WD40-rpts                                                                                      

Query      241 CVENPKPIFGICLGHQLLSLVIGAKTYKMKYGNRGHNQPCIHKGTSRCYITSQNHGFAVDPETLPKDWDVLFTNANDQTS 320 
WD40-rpts                                                                                      

Query      321 EGIVHNHKPLFSVQFHPEHMAGPTDLVGLFDVFLDTVRDVKENKAGKSVKQRLMEHLTFPGSPDPNAFVRPRKVLVLGSG 400 
WD40-rpts                                                                                      

Query      401 GLSIGQAGEFDYSGSQAIKAMKEENIQTILINPNIATVQTSKGLADKVYFLPITPEYVTQVIKNERPDGVLLTFGGQTAL 480 
WD40-rpts                                     (________________________________WD 1____________

Query      481 NCGVELKKQGVLEKYKVRVLGTPVASIEMTEDRKIFVEKMEEINEHVAPSEAAMSVEQAVAAAERLGYPVLVRSAFALGG 560 
WD40-rpts      ____________________)                                                           

Query      561 LGSGFANNRDEMITLVTQAFAHTSQVLVDKSLKGWKEIEYEVVRDAYDNCVTVCNMENIDPLGIHTGESIVVAPSQTLND 640 
WD40-rpts                                                                                      

Query      641 YEYNMLRNTAIKVIRHLGVVGECNIQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLSLGIPLPVLKNSV 720 
WD40-rpts                                                                                      

Query      721 TNSTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMAIGRSFEEAFQKALRMVDENCVGFDHTIKPESEEE 800 
WD40-rpts                                                                                      

Query      801 LQTPTDKRIFVLAAALHAGYTVERLYELTKIDHWFLHKMKNIADHKKLLETYKQDESAMPPEIMRKAKQLGFSDKQIAQA 880 
WD40-rpts                                                                                      

Query      881 VQSTELAVRKLRRDWKIFPVVKQIDTVAAEWPAQTNYLYLTYHGSESDVVFEQPHVMVIGSGVYRIGSSVEFDWCAVGCI 960 
WD40-rpts                                                                                      

Query      961 MELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYEMENPEGVILSMGGQLPNNIAMSLHRQQCRILGTSP 1040
WD40-rpts                                                                                      

Query     1041 EFIDNAENRFKFSRMLDTIGISQPRWKELSDTESAVNFCETVGYPCLVRPSYVLSGAAMNVAYSDTDMEKFLSSAVAVSK 1120
WD40-rpts                                                                                      

Query     1121 EHPVVISKFIQEAKEIDVDAVACDGEVIAIAVSEHVENAGVHSGDATLVTPPQDINQKTMERIKMIVHAIGQELQVTGPF 1200
WD40-rpts                                                                                      

Query     1201 NLQLIAKDDQLKVIECNVRVSRSFPYVSKTLGVDLVALATRVILGEEVEAVGLMRGNGIVGVKVPQFSFSRLAGADVVLG 1280
WD40-rpts                                                                                      

Query     1281 VEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNILLSIGSYKNKSELLPTVQTLESLGYNLYASLGTADFYTEHGVKV 1360
WD40-rpts                                                                                      

Query     1361 MAVDWPFEEESDCPNKDKQRNIMDYLEENHFDLVINLSMRNSGGRRLSSFVTKGYRTRRMAIDFSVPLITDIKCTKLFVQ 1440
WD40-rpts                                                                                      

Query     1441 ALKQIGQAPRVKTHVDSMTSQKLIRLPGLIDVHVHLREPGATHKEDFSSGTAAALAGGITMVCAMPNTNPAIIDPNSFTM 1520
WD40-rpts                                                                                      

Query     1521 AQKLAKAGCRCDYALFVGASSDNAALLPSIASSTAGLKMYLNDTYSTLKMDNVSLWMEHFEKWPKHLPIVAHAEKQTVAA 1600
WD40-rpts                                                                                      

Query     1601 ILLVAQLYQRPVHICHVAKKEEILIIRAAKQKGIQVTCEVAPHHLFLCEDNVPVIGKDKAQVRPMLGTREDMEALWENLD 1680
WD40-rpts                                                                                      

Query     1681 IIDCFATDHAPHSAEEKISEKPPPGYPGLETMLPLLFTAVSEGRLTVDDIIKRLYENPRKIFSLPAQEDTYVEVDLEQEW 1760
WD40-rpts                                                                                      

Query     1761 IIPKHMQFTKSKWTPFEGMKVKGKVMRVVLRGEVAYIDGQVLVPPGYGQDVKSWSATPTATTEVIMDAPKRVIEAMTPER 1840
WD40-rpts                                                                                      

Query     1841 PRQAAPVDVVRSRAPSPRRSAGDGRFILPPRIHRSSDPGLPPELALPAEAYAHPPPLARILSPQAGQPQILPHPQTSPLL 1920
WD40-rpts                                                                                      

Query     1921 HPLVGQHILSVRQFSKEQMSHLFNVAHTLRLMVQKERPLDILKGKVMASMFYEVSTRTSSSFAAAMHRLGGSVVHFCEST 2000
WD40-rpts                                                                                      

Query     2001 SSTQKGESLVDSVNTMSCYADVIVLRHPIPGAVESAARHCRRPVINAGDGVGEHPTQALLDIFTIREELGTVNGMTITMV 2080
WD40-rpts                                                                                      

Query     2081 GDLKHGRTVHSLARLLTQYRITLRYVAPKNLSMPAEIIDFVASKGIKQEEFNSIEEALPDTDVLYMTRIQKERFSSEKEY 2160
WD40-rpts                                                                                      

Query     2161 NACFGQFILTPHIMTGAKRKMVVMHPLPRVNEISVEVDTDPRAAYFRQAENGMYIRMALLATVLGR 2226
WD40-rpts                                                                        

1 WD40-repeats found in QUERY=ENSDARP00000106816 (Len=2226):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 19   432-501      2.78  229.62  0.04894       25.0%      3.26

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  432-501    NPNIATVQTSKGLADKVYFLPITPEYVTQVIKNERPDGVLLTFGGQTALNCGVELKKQGVLEKYKVRVLG

   WD40 Template    TGEC--LRTLSGHTSGVTSVSFS------------PDGKRLVSGS----------------EDGTIKVWD