Input parameters:

  Query = ENSDARP00000106765 (Len=539)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000106765, Len=539):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNY 80  
WD40-rpts      (________________WD 1_______________)   (_________________WD 2________________) 

Query       81 KLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWWPLLTVSKGFFEGAIAAKGRAGQMVADLDMDAPGGEGW 160 
WD40-rpts        (_________________WD 3________________)(_________________WD 4________________)

Query      161 GEDAELHLDEDGFMDAQEGLGDEGAIGKDDGGGWDVEEDLDLPPELDVPSVGGGGAEGEGFFVPPTKGTSPTQMWCNNSQ 240 
WD40-rpts                                                                                      

Query      241 LSVDHILAGSFETAMRLLHDQVGVVQFGPYKQLFMQTLSRGRTCYLGLPSLPCLHSFPLRNWKDSGPKGGLPAVGLRLAD 320 
WD40-rpts                                                                                      

Query      321 LISRLQQCYQLTTSGRFEDAVERFRAILLSVPLLVVDNKQEIAEAQQLITICKEYIIGLTMETERKKLPKDSLDEQKRIC 400 
WD40-rpts                                                                                      

Query      401 EMAAYFTHCSLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPEVAQQTRKILSACEKSLTDAHQLNYDPHNP 480 
WD40-rpts                                                                                      

Query      481 FDICAASYTPLYRGRPVEKCPLSGACYCPKYKGEVCRVTQVTEIGKDVIGLRVSPLQFR 539 
WD40-rpts                                                                 

4 WD40-repeats found in QUERY=ENSDARP00000106765 (Len=539):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-37       8.36  460.10  3.9e-05       22.5%     44.88
  WD 2:  Seg  4    41-79       9.16  492.96  1.4e-05       27.5%     55.11
  WD 3:  Seg  8    83-121      9.63  512.46  7.7e-06       32.5%     52.86
  WD 4:  Seg 12   122-160      4.53  301.59  0.00536       12.5%     19.95

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-37     ---MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWD
   WD 2   41-79     -CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWN
   WD 3   83-121    -RRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN
   WD 4  122-160    WWPLLTVSKGFFEGA-IAAKGRAGQMVADLDMDAPGGEGW

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD