Input parameters:

  Query = ENSDARP00000106758 (Len=557)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000106758, Len=557):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MATDIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYNPSVIRHLENRLWQRDHRDFR 80  
WD40-rpts      (____________________________WD 1___________________________)                   

Query       81 AVQPDAGCYNELVPPVGMISNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAH 160 
WD40-rpts                        (______________________WD 2_____________________)   (_________

Query      161 DSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL 240 
WD40-rpts      ________WD 3________________)  (_________________WD 4________________)   (______

Query      241 RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNGNWLLTASRDHLCKLFDIRNL 320 
WD40-rpts      ____________WD 5_________________)   (_________________WD 6________________)    

Query      321 KEELQVFRGHKKEATAVAWHPVHEGMFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSK 400 
WD40-rpts      (_________________WD 7_________________)(___________________WD 8________________

Query      401 FWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDMDTNSIAAIPGMGIPEQLKAAMEQEQSGKDMVAEPEMSIPGLDWGMEE 480 
WD40-rpts      __)(_________________WD 9_________________)___________________WD10______________

Query      481 VMLRDQKKAPTKKVPYAKPIPAQFQQAWAENKVPVMPAGEVPKERKDEKKVDSKKKTQAEIEQEMAALQYTNPMLLE 557 
WD40-rpts      ____)                                                                        

10 WD40-repeats found in QUERY=ENSDARP00000106758 (Len=557):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-61       3.83  272.68  0.01309       20.0%     26.88
  WD 2:  Seg  5    99-147      7.45  422.34  0.00013       25.0%     40.32
  WD 3:  Seg  9   151-189      8.62  470.84  2.8e-05       20.0%     56.00
  WD 4:  Seg 13   192-230      9.51  507.42  9.0e-06       27.5%     52.52
  WD 5:  Seg 17   234-274      8.32  458.43  4.1e-05       40.0%     55.29
  WD 6:  Seg 21   278-316      9.47  505.80  9.5e-06       32.5%     54.63
  WD 7:  Seg 24   321-360      7.56  427.00  0.00011       30.0%     49.78
  WD 8:  Seg 28   361-403      8.35  459.42  4.0e-05       35.0%     51.10
  WD 9:  Seg 32   404-443      7.70  432.67  9.2e-05        7.5%     27.96
  WD10:  Seg 33   443-485      3.57  262.15  0.01811        7.5%     11.33

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-61     MA---TDIGSPPRFFHMPRFQHQAPRQLFYKR---------P----DFAQQQAMQQLTF--DGK-RMRKAVNRK--TIDYNP
   WD 2   99-147    IS---NPM-----------------------NAVTTKFVRTS----TNKVKCPVFVVRWTPEGR-RLVTGASSG--EFTLWN
   WD 3  151-189    -F---NFE-----------------------T---------I----LQAHDSPVRAMTWSHNDM-WMLTADHGG--YVKYWQ
   WD 4  192-230    -M---NNV-----------------------K---------M----FQAHKEAIREASFSPTDN-KFATCSDDG--TVRIWD
   WD 5  234-274    -C---HEE-----------------------R---------I----LRGHGADVKCVDWHPTKG-LVVSGSKDSQQPIKFWD
   WD 6  278-316    -G---QSL-----------------------A---------T----LHAHKNTVMEVKWNLNGN-WLLTASRDH--LCKLFD
   WD 7  321-360    -K---EEL-----------------------Q---------V----FRGHKKEATAVAWHPVHEGMFASGGSDG--SLLFWH
   WD 8  361-403    VGVEKEVG-----------------------G---------M----EMAHEGMIWSLAWHPLGH-ILCSGSNDH--TSKFWT
   WD 9  404-443    RN---RPG-----------------------D---------K----MRDRYNLNLLPGMSEDGV-EYDDMDTNS--IAAIPG
   WD10  443-485    -G---MGI-----------------------P---------EQLKAAMEQEQSGKDMVAEPEMS-IPGLDWGME--EVMLRD

   WD40 Template    TG---ECL-----------------------R---------T----LSGHTSGVTSVSFSPDGK-RLVSGSEDG--TIKVWD