Input parameters:

  Query = ENSDARP00000106181 (Len=965)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000106181, Len=965):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAARWSSENVVVEFRDAQANAMSVDCLGQHAVLSGRRFLYVVNLETPSEAPRKISRQSKWDVGTVQWNPHKSDAHIFAAS 80  
WD40-rpts          (_________________WD 1________________)                                     

Query       81 SNQRVDLYTWRDGSGKSHTSLQGHTRVISDLDWSWFEPEFLVTSSVDTYIYIWDTSDTRRPTVTLSAVAGASQVKWNRRN 160 
WD40-rpts                    (_________________WD 2_________________)   (_________________WD 3_

Query      161 HYCLASSHDGDVRIWDKRKSNTAVEYVAAHLSKINGLDWHPDNEYILATSSQDNSVRKFWDYRQPRKYLDILSCQVPVWK 240 
WD40-rpts      _______________)    (__________________WD 4_________________)   (_______________

Query      241 ARYTPFSNGLVTVMVPQLRRENSLLLWSTLELNSPVHAFVGHDDVVYEFQWRPQKEGSKDCQLVTLSRDQTLRIWRVDPQ 320 
WD40-rpts      ____WD 5___________________)    (___________________WD 6___________________)(___

Query      321 LQKLCCANEIVDELTTETEKTLRSQDSEPPLSPGFTADNSLDQFDGPQSGLSSSAKNDIPQTLQQEFSLVNLQIRNVNVE 400 
WD40-rpts      ______________WD 7_________________)(_________________WD 8_________________)    

Query      401 MDAVNRSCFVSADCGANRVRLVVKFPAQYPNNAAPSFQFVPPTNISSSMKIKIQKILTDTSLQKVKRNQNCLEPCVRQLV 480 
WD40-rpts                                                                                      

Query      481 SCLESDGVMEDGSNPYVLTNPVTPALPAFPRVTNTYGSYQDANIPFPRTSGARFCGTGSLVYFTRPMTMHRATPPTEPTP 560 
WD40-rpts                                                                                      

Query      561 RSLSALSAYHSGVMTPMKMRTESQTTLRLYSGSPTRTDKDQVSISSFYYKERKSRRWKGKREGGDYSNRPIKLAGKVIIQ 640 
WD40-rpts                                                                                      

Query      641 EISCLLSVHKALGETYVLNVNDIQDTCQKNGAAALAVARRDLAKVWALASASTNLNLSPDPDPDAGTPWAKHPFGRHLLE 720 
WD40-rpts                                                                                      

Query      721 TLLEHYSQLSDVQSLAMLCSVFRGHGSPQEYFTLYGHQQPRPAVFTPHHSRYPSFTSSSVTSGSCSSTSDSANTPWNTGG 800 
WD40-rpts                                                                                      

Query      801 RESEHPPSWGESTPDDYRYANQTYTDPREREKEQHDMNKRLLDPSNSWQFDDFKKCYGEILHRWGMKDKRAEVLKFVSCP 880 
WD40-rpts                                                                                      

Query      881 PEPHKGIEFGVYCCHCRSQARGTQCAVCKRFTFQCSICHVAVRGSSNFCLSCGHGGHTSHMMDWFRSQDVCPTGCGCHCL 960 
WD40-rpts                                                                                      

Query      961 QQSTF 965 
WD40-rpts           

8 WD40-repeats found in QUERY=ENSDARP00000106181 (Len=965):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     5-43       3.26  249.46  0.02674       10.0%     45.34
  WD 2:  Seg  8    95-134      7.22  413.03  0.00017       32.5%     54.19
  WD 3:  Seg 11   138-176      6.19  370.44  0.00063       17.5%     49.46
  WD 4:  Seg 15   181-221      5.75  352.18  0.00112       25.0%     40.26
  WD 5:  Seg 18   225-268      4.04  281.39  0.01001       12.5%     49.57
  WD 6:  Seg 22   273-316      6.26  373.11  0.00058       25.0%     52.35
  WD 7:  Seg 26   317-356      4.21  288.62  0.00800       12.5%     18.25
  WD 8:  Seg 29   357-396      4.71  309.16  0.00424       15.0%     11.90

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    5-43     WSSENVVVEFRDAQANAMSVDC-LGQ-----H-AVLS-----G-RRFL-YVVN
   WD 2   95-134    -GKSHTSLQGHTRVISDLDWSWFEPE-----F-LVTS-----SVDTYI-YIWD
   WD 3  138-176    -TRRPTVTLSAVAGASQVKWNR-RNH-----Y-CLAS-----SHDGDV-RIWD
   WD 4  181-221    -NTAVEYVAAHLSKINGLDWHP-DNE-----YILATS-----SQDNSVRKFWD
   WD 5  225-268    -PRKYLDILSCQVPVWKARYTP-FSN-----G-LVTVMVPQLRRENSL-LLWS
   WD 6  273-316    -NSPVHAFVGHDDVVYEFQWRP-QKEGSKDCQ-LVTL-----SRDQTL-RIWR
   WD 7  317-356    VDPQLQKLCCANEIVDELTTET-EKT-----L-RSQD-----SEPPLS-PGFT
   WD 8  357-396    ADNSLDQFDGPQSGLSSSAKND-IPQ-----T-LQQE-----FSLVNL-QIRN

   WD40 Template    TGECLRTLSGHTSGVTSVSFSP-DGK-----R-LVSG-----SEDGTI-KVWD