Input parameters:

  Query = ENSDARP00000106107 (Len=431)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000106107, Len=431):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRK 80  
WD40-rpts      (_________________WD 1________________)  (___________________WD 2_______________

Query       81 LKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGS 160 
WD40-rpts      ____)(__________________WD 3_________________)   (__________________WD 4________

Query      161 ATIGEVQVFDTVNLRAANMIPAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM 240 
WD40-rpts      _________)   (_________________WD 5_________________)(____________________WD 6__

Query      241 EGLYLSASSNTETVHIFKLETQREKPQEEPTTWTGYFGKVLMASTTYLPAHVTEMFTQGRAFATVRLPFSGHKNICALAI 320 
WD40-rpts      _________________)    (_________________WD 7________________)(_________________W

Query      321 IQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHKLDGSAEPANEILEQTAHDRPLVAQTYSAAVAKEYAVIAGYSEDQ 400 
WD40-rpts      D 8________________)     (________________WD 9________________)   (_____________

Query      401 GAVGGAGVEDDMNTLHLDEENEQPPLILETD 431 
WD40-rpts      _____WD10__________________)   

10 WD40-repeats found in QUERY=ENSDARP00000106107 (Len=431):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-39       6.75  393.66  0.00031       15.0%     45.31
  WD 2:  Seg  4    42-85       7.31  416.67  0.00015       17.5%     43.58
  WD 3:  Seg  8    86-126      5.90  358.43  0.00092        5.0%     27.25
  WD 4:  Seg 12   130-170      6.73  392.75  0.00032       25.0%     43.38
  WD 5:  Seg 16   174-213      8.14  451.06  5.2e-05       27.5%     55.55
  WD 6:  Seg 20   214-258      7.22  412.88  0.00017       22.5%     45.86
  WD 7:  Seg 24   263-301      5.13  326.52  0.00247        7.5%      9.84
  WD 8:  Seg 25   302-340      6.15  368.90  0.00066       12.5%     53.68
  WD 9:  Seg 29   346-383      4.24  289.80  0.00772       15.0%     43.73
  WD10:  Seg 31   387-428      3.63  264.68  0.01675       12.5%     30.54

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-39     MNLA-----SQSG----E-AGCS---QLLFANFNQDNTSLAVGT-K--S--G-YKFFS
   WD 2   42-85     SVDK-----LEQIYECTD-TEDV---CIVERLFSSSLVAIVSLKAP--R--K-LKVCH
   WD 3   86-126    FKKG-----TEIC----NYSYSN---TILAVKLNRQRLIVCLEESL--Y--I-HNIRD
   WD 4  130-170    -LHT-----IRET----P-PNPS---GLCALSISNDNCYLAYPGSATIG--E-VQVFD
   WD 5  174-213    -LRA-----ANMI----P-AHDS---PLAALAFDASGTKLATASEK--G--TVIRVFS
   WD 6  214-258    IPEGQKLFEFRRG----V-KRCV---SICSLAFSMEGLYLSASSNT--E--T-VHIFK
   WD 7  263-301    -REK-----PQEE----P-TTWT---GYFGKVLMASTTYLPAHVTE--M--F-TQGRA
   WD 8  302-340    -FAT-----VRLP----F-SGHK---NICALAIIQKIPRLLVAAAD--G--Y-LYLYN
   WD 9  346-383    -GGE-----CTLM----K-QHK------LDGSAEPANEILEQTAHD--RPLV-AQTYS
   WD10  387-428    -AKE-----YAVI----A-GYSEDQGAVGGAGVEDDMNTLHLDEEN--E--Q-PPLIL

   WD40 Template    TGEC-----LRTL----S-GHTS---GVTSVSFSPDGKRLVSGSED--G--T-IKVWD