Input parameters:

  Query = ENSDARP00000106007 (Len=378)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000106007, Len=378):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MERHKRMNLLGSSREEGVCAEMAMVCLDDFEEYAKQHLSKSTWDYYEAGADECCTRDDNLQAYKRIRLRPRILRDVSIND 80  
WD40-rpts                                                                                      

Query       81 TRTSVLGREISFPVGIAPTAFHCLAWHEGELATARATEALNTCYIASTYATCSVEEIAAAAPNGYRWFQLYLYRDRKLSE 160 
WD40-rpts                                                                                      

Query      161 QIVHRVEALGYKALVLTVDVPYTGKRRNDIRNQFKLPPHLKVKNFEGMFQEQTEAQEEYGIPANTLDPSISWKDVCWLQS 240 
WD40-rpts                                                                                      

Query      241 LTRLPIIIKGILTKEDAELAVEHGVQGIIVSNHGGRQLDGGPATIDCLPEIVDTVQGRVEVYMDGGIRTGNDVLKAIALG 320 
WD40-rpts      (______________________________________WD 1_____________________________________

Query      321 ARCVFIGRPAIWGLAYKGEDGVKEILNILHDEFRLSMVLAGCRNVAEINRNLIQFSRL 378 
WD40-rpts      _)                                                        

1 WD40-repeats found in QUERY=ENSDARP00000106007 (Len=378):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   241-322      3.73  268.67  0.01482       25.0%      4.27

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  241-322    LTRLPIIIKGILTKEDAELAVEHGVQGIIVSNHGGRQLDGGPATIDCLPEIVDTVQGRVEVYMDGGIRTGNDVLKAIALGAR

   WD40 Template    TGECLRTLSGHTS----------GVTSVSFSPDGKRLVSGS---------------------EDGTIKV-----------WD