Input parameters:

  Query = ENSDARP00000105555 (Len=799)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000105555, Len=799):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSGSNSYRLRSSLPAHDMDVRGLAAVAFPDGAFVSVSRDRTARVWVPNPSENQSFTEMHCMNGHSNFVSCVCIISPNETY 80  
WD40-rpts           (__________________WD 1_________________)        (___________________WD 2__

Query       81 PRGLIATGGHDNNICVFSLDRPDPLFTLKGHKNTVCTLSAGKFGTILSGSWDTTAKVWLGEKCMMTLQGHTAAVWAVLIL 160 
WD40-rpts      _________________)   (________________WD 3________________)(_________________WD 

Query      161 PEQGLMLSGSADKTIKLWKAGRCEKTYTGVTICCNGEIVCEDVEFFSCSNDASIRRWMVTGECVQVYYGHTNYIYSIAVF 240 
WD40-rpts      4_________________)(_________________WD 5________________)  (_________________WD

Query      241 PNGKDFISTGEDRTLRVWKEGECSQTIRLPAQSVWCCCILPNGDIAVGASDGIIRVFTESEDRVASAQDLQAFEDELSKA 320 
WD40-rpts       6________________)(_________________WD 7________________)                      

Query      321 VIDPKTGDLGDIKIEELPGREHLDEPAGNRDGQTRLIKEGSNVEAYQWSMSDGRWMKIGYVVGGSSQQSSKRVMYEGKEY 400 
WD40-rpts                                                                                      

Query      401 DFVFTIDVNEGGPPMKLPYNVTDDPWLVAHNFLQKNDLSPMFLDQVANFIIENTKGHTLGAAPASAADPFTGAGRYIPGS 480 
WD40-rpts                                                                                      

Query      481 GGNGQQFGADPFTGAGRYIPGSGSTGTAPSGGADPFTGGSAYSSPSLPKSTTNIFFPNTDGVMFEQSNTAQILGKLRELN 560 
WD40-rpts                                                                                      

Query      561 TSAPADHKLSDAALDCLEKLLNLVTELPNLEQPTAEQITVLWRACHWPEDIVFPVLDILRLAVRHPEVNAHLCGGTEGAS 640 
WD40-rpts                                                                                      

Query      641 LCNHLLGLMSPEGKAANQMLALRTLCNCFTASHGRALLLGQRDAVLSRAGDLRTVCNKNIHVALATLVLNYAGRLYGQPA 720 
WD40-rpts                                                                                      

Query      721 EIEAKAQCLSVASTALEVVQDKEAVFRLLVALGTTVSGDSTAKDLARSLGVNSQISKYARVSDPAKVGECCRLVLDELQ 799 
WD40-rpts                                                                                     

7 WD40-repeats found in QUERY=ENSDARP00000105555 (Len=799):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     6-46       6.34  376.60  0.00052       25.0%     51.15
  WD 2:  Seg  5    55-98       5.41  338.31  0.00172       20.0%     53.42
  WD 3:  Seg  9   102-139      7.70  432.82  9.1e-05       40.0%     50.94
  WD 4:  Seg 13   140-179     10.96  567.24  1.4e-06       42.5%     54.53
  WD 5:  Seg 17   180-218      8.21  453.75  4.8e-05       27.5%     51.14
  WD 6:  Seg 21   221-259     10.20  536.17  3.7e-06       40.0%     55.31
  WD 7:  Seg 25   260-298      8.04  446.91  5.9e-05       30.0%     53.05

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    6-46     SYRLRSSLPAHDMDVRGLAAVAFPDG-----AFVSVSRDRTARVWV
   WD 2   55-98     -FTEMHCMNGHSNFVSCVCI-ISPNETYPRGLIATGGHDNNICVFS
   WD 3  102-139    -PDPLFTLKGHKNTVCTLSA-GKFGT------ILSGSWDTTAKVWL
   WD 4  140-179    GEKCMMTLQGHTAAVWAVLI-LPEQG-----LMLSGSADKTIKLWK
   WD 5  180-218    AGRCEKTYTGVTICCNGEIV-CEDVE------FFSCSNDASIRRWM
   WD 6  221-259    -GECVQVYYGHTNYIYSIAV-FPNGK-----DFISTGEDRTLRVWK
   WD 7  260-298    EGECSQTIRLPAQSVWCCCI-LPNGD------IAVGASDGIIRVFT

   WD40 Template    TGECLRTLSGHTSGVTSVSF-SPDGK-----RLVSGSEDGTIKVWD