Input parameters:

  Query = ENSDARP00000105210 (Len=488)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000105210, Len=488):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MERSASERTALRRFGDSGMMLLPWTKQILTVVWEHLRLLVQVICCTLMTVFQMFRFEVHLRITDETGQHIQHMTSSTGDP 80  
WD40-rpts                   (______________________________________________WD 1________________

Query       81 SDSFLLSSLFENNTNIVVGGSSPLSKFGRDPFDVSSHSRAVLSSLVSDELCCSLVDDLVSHATECLNDTDDLYIGDHSVW 160 
WD40-rpts      _____________________________)                                                  

Query      161 KHGYDWTVLGGSERKCGSESTCTFSAHVAGFTKEFVKHQKPISDPGSCALSKENVQSSRQVQSISHFSDSEFSWGSTDSS 240 
WD40-rpts                                                                                      

Query      241 CFEGEREESDKLWDLLTKSTDPYHPLHFTACLSTVVTEKPKPEVVSKAESPIASQSTVSTSSDSSKPGSEDEEEEALWRS 320 
WD40-rpts                                                                                      

Query      321 LSQNDDPYHPLNFRAPLQSSSVTPVPSKHDSPSNNMQNTPIRPLKSSRRSKPALLPNKVARHCCRKLSVETLSVVPWKRH 400 
WD40-rpts                                                                                      

Query      401 VGVTSVQGNQKRSPKLKKVKFSPVVQVHKMRAWSFALQASRKGPWEELARDRDRFRKRIGDTEKAIGYCFSLSNREKMRA 480 
WD40-rpts                                                                                      

Query      481 YRDTVQKK 488 
WD40-rpts              

1 WD40-repeats found in QUERY=ENSDARP00000105210 (Len=488):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    14-110      2.98  237.75  0.03824       27.5%      0.79

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   14-110    FGDSGMMLLPWTKQILTVVWEHLRLLVQVICCTLMTVFQMFRFEVHLRITDETGQHIQHMTSSTGDPSDSFLLSSLFENNTNIVVGGSSPLSKFGRD

   WD40 Template    TGECLRTLS---------------------------------------------GH------TSGVTSVS------FSPDGKRLVSGSEDGTIKVWD