Input parameters:

  Query = ENSDARP00000104760 (Len=369)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000104760, Len=369):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSDALVCVRDYELRARQILPKSVFDYYFSGADEQETLRDNVAAFKRWCFYPRVLRDVSSVDLSTTVLGQRVSLPICVSAT 80  
WD40-rpts                                                                                      

Query       81 AMQRMAHPDGETATARACLSSGTGMMLSSWSTSSIEEVCEAAPGAVRWLQLYIYKDRTLTQSLVRRAEDAGYKGIFVTVD 160 
WD40-rpts                                                                                      

Query      161 TPYLGRRRDDVRNRFKLPSHLRMANFESPDLAFSKKEGYGEDSGLAVYVTQAIDATVRWQDIGWLKTLTKLPVVVKGVLT 240 
WD40-rpts                                                                         (____________

Query      241 AEDAKEALKYGVDGILVSNHGARQLDGVPATIDALPEVVAAVAGQVEVFMDGGVRMGSDVLKALALGAKAVFIGRPVLWA 320 
WD40-rpts      _________________________WD 1_____________________________________)             

Query      321 LACQGEKGVSDVLEILREELHLALALAGCRSLKEVNRSLLRRPELISRI 369 
WD40-rpts                                                       

1 WD40-repeats found in QUERY=ENSDARP00000104760 (Len=369):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   228-307      3.73  268.88  0.01472       22.5%      7.34

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  228-307    LTKLPVVVKGVLTAEDAKEALKYGVDGILVSNHGARQLDGVPATIDALPEVVAAVAGQVEVFMDGGVRMGSDVLKALALG

   WD40 Template    TGECLRTLSGHTS----------GVTSVSFSPDGKRLVSGS---------------------EDGTIKVW---------D