Input parameters:

  Query = ENSDARP00000104416 (Len=538)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000104416, Len=538):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNY 80  
WD40-rpts      (________________WD 1_______________)   (_________________WD 2________________) 

Query       81 KLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWPLLTVSKGFFEGAIAAKGRAGQMVADLDMDAPGGEGWG 160 
WD40-rpts        (_________________WD 3________________)                                       

Query      161 EDAELHLDEDGFMDAQEGLGDEGAIGKDDGGGWDVEEDLDLPPELDVPSVGGGGAEGEGFFVPPTKGTSPTQMWCNNSQL 240 
WD40-rpts                                                                                      

Query      241 SVDHILAGSFETAMRLLHDQVGVVQFGPYKQLFMQTLSRGRTCYLGLPSLPCLHSFPLRNWKDSGPKGGLPAVGLRLADL 320 
WD40-rpts                                                                                      

Query      321 ISRLQQCYQLTTSGRFEDAVERFRAILLSVPLLVVDNKQEIAEAQQLITICKEYIIGLTMETERKKLPKDSLDEQKRICE 400 
WD40-rpts                                                                                      

Query      401 MAAYFTHCSLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPEVAQQTRKILSACEKSLTDAHQLNYDPHNPF 480 
WD40-rpts                                                                                      

Query      481 DICAASYTPLYRGRPVEKCPLSGACYCPKYKGEVCRVTQVTEIGKDVIGLRVSPLQFR 538 
WD40-rpts                                                                

3 WD40-repeats found in QUERY=ENSDARP00000104416 (Len=538):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-37       8.22  454.02  4.7e-05       22.5%     46.23
  WD 2:  Seg  4    41-79       9.05  488.40  1.6e-05       27.5%     55.88
  WD 3:  Seg  8    83-121      9.61  511.61  7.9e-06       32.5%     54.79

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-37     --MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWD
   WD 2   41-79     CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWN
   WD 3   83-121    RRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWN

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD