Input parameters:

  Query = ENSDARP00000103752 (Len=413)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000103752, Len=413):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAVVCSKADWFVTSCSTTLVAVNLKQSREPFVFDCSKAEKKPKEADVDNKSAGEGSEEKDSDSILAFAISASGKHVALTD 80  
WD40-rpts                                        (_________________________WD 1________________

Query       81 DHKRLVLFCTEPSWKCISTRWVVRRCTSLAFTQAEDELYVADKSGDVYSFSILEPHKAGELKLGHLSMLLDVALSPDDKY 160 
WD40-rpts      ________)   (_________________WD 2________________)     (________________WD 3___

Query      161 IITADRDEKIRVSFRRSPYNIQAFCLGHTEFVSSLLVPAGHPDWLLSGSGDGTVNVWHYETGRRLHSVDMRKFGLDSENT 240 
WD40-rpts      _____________)(___________________WD 4___________________)              (_______

Query      241 EKRFAVSRIISSPDGQHVAVQCEGFPSVQLFTVDCGTEGLLKPADTLTLPLSPWDVTFDSENQLWVLLESEDMKVLLYRH 320 
WD40-rpts      __________WD 5_________________)          (________________WD 6_______________)(

Query      321 SEQHWRLCDSESPELKKVTNALQTQWHLFKGSVGLESQFKHLYKVNFDNMASYLQKKQERLDLEHKKRAAAANGSKPNKK 400 
WD40-rpts      _____________WD 7_____________)                                                 

Query      401 SKTESGAVPQSTS 413 
WD40-rpts                   

7 WD40-repeats found in QUERY=ENSDARP00000103752 (Len=413):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    35-89       6.60  387.13  0.00038        7.5%     42.73
  WD 2:  Seg  7    93-131      8.10  449.39  5.5e-05       12.5%     57.34
  WD 3:  Seg 11   137-174      8.80  478.25  2.2e-05       27.5%     43.40
  WD 4:  Seg 14   175-218      7.73  433.88  8.8e-05       35.0%     51.11
  WD 5:  Seg 19   233-272      6.27  373.85  0.00057       12.5%     41.37
  WD 6:  Seg 23   283-319      4.89  316.70  0.00335       17.5%     39.18
  WD 7:  Seg 27   320-351      3.80  271.50  0.01358       10.0%     35.82

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   35-89     CS---KAEKKPKEADVDNKSAGEGSEEKDSDSILAFAISA-SGKHVA-LTDDHKRLVLFC
   WD 2   93-131    -S---WKCI---------------STRWVVRRCTSLAFTQ-AEDELY-VADKSGDVYSFS
   WD 3  137-174    -----KAGE---------------LKLGHLSMLLDVALSP-DDKYII-TADRDEKIRVSF
   WD 4  175-218    RRSPYNIQA---------------FCLGHTEFVSSLLVPAGHPDWLL-SGSGDGTVNVWH
   WD 5  233-272    -F---GLDS---------------ENTEKRFAVSRIISSP-DGQHVAVQCEGFPSVQLFT
   WD 6  283-319    PA---D------------------TLTLPLSPWDVTFDSE-NQLWVL-LESEDMKVLLYR
   WD 7  320-351    --------------------------HSEQHWRLCDSESP-ELKKVT-NALQTQWHLFKG

   WD40 Template    TG---ECLR---------------TLSGHTSGVTSVSFSP-DGKRLV-SGSEDGTIKVWD