Input parameters:

  Query = ENSDARP00000103591 (Len=1325)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000103591, Len=1325):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFRKRPPPEEERRVRANDREYNEKFQYASNCIMTSKYNIITFLPVNLFEQFQEVANTYFLFLLILQLIPQISSLSWFTTI 80  
WD40-rpts                                                                                      

Query       81 VPLVLVLSITAVKDATDDYFRHKSDNQVNNRQSQVLIGGILQKEKWMNVRVGDIIKLENNQFVAADLLLLSSSEPHGLCY 160 
WD40-rpts                                                                                      

Query      161 IETAELDGETNMKVRQSLSVTSELGDPNNLAQFDGEVVCEPPNNKLDRFCGTLYWRECKYPLSNQNMLLRGCVLRNTESC 240 
WD40-rpts                                                                                      

Query      241 YGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAVWEKEVGALFQSFLPWDPPVDNFLFS 320 
WD40-rpts                                                                                      

Query      321 AFLSFWSYVIILNTVVPISLYVSVEVIRLGHSYFINWDRRMFCSRSNTAAEARTTTLNEELGQVEYIFSDKTGTLTQNIM 400 
WD40-rpts                                                                                      

Query      401 TFNKCSINGHAYGEVVNILAAQQKRVQPLDFSSWNPLADRGFCFYDQSLLEAVMVGDPAVHEFFRVLSLCHTVMSEEKSE 480 
WD40-rpts                                                                                      

Query      481 GELVYKAQSPDEGALVTAARNFGFVFRSRTPGTITTQELGKAVTYTLLAILDFNNIRKRMSVIVRNPEGRIRLYCKGADT 560 
WD40-rpts                                                                                      

Query      561 VLLERLHSCNHEVMTITSDHLNEYAVDGLRTLAVAYRDLSEEQWDEWSERFRGADKATDCREDRLAAAYEEIEQDMMLLG 640 
WD40-rpts                                (______________________________________WD 1___________

Query      641 ATAIEDKLQEGVPETIAILSLANIKIWVLTGDKQETAVNIGYSCKMLTDDMTEVFIVNGHTVQSVREELRKARERMLESA 720 
WD40-rpts      ___________________________)                                                    

Query      721 RTRDGGKEAEAQGWSGACAFGNGCGAGAAAAAANWAPDESKCPPAQAPPSSLLESISGEFALIISGHSLAHALEADMERE 800 
WD40-rpts                                                                                      

Query      801 FLETACACRAVICCRVTPLQKALVVELVKRHKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFRFL 880 
WD40-rpts                                                                                      

Query      881 QRLLLVHGRWSYLRMCRFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGIFDQDVPEQRS 960 
WD40-rpts                                                                                      

Query      961 LEYPKLYEPGQLNLLFNKREFFICIAQGIYTSVVLFFIPYGVLSHATQSNGVPLADYQTFAVTTATALVIVVSVQIALDT 1040
WD40-rpts                                                                                      

Query     1041 GYWTAINHFFVWGSLGTYFTILFAMHSSILFSIFPKQFHFLGSAHNTLGQPVVWLTIALATVICIAPVLAFRFLKLDLKP 1120
WD40-rpts                                                                                      

Query     1121 QLSDTVRYTQLVLQKKRKPGGRAARGVGSTGAAGGSGLGRLGRGGSRRSGYAFAHQEGFGELITSGKNMRLSSLALATFA 1200
WD40-rpts                                                                                      

Query     1201 SRHSSSWIDTLRRKKHTNNTGAQNTPPTGDDITTSSQVPPNSTASTPNVQQDSAAGDAGQASNEVAFTHSPEDIALCVVR 1280
WD40-rpts                                                                                      

Query     1281 DRDAGGCSAGSVQESAIVWKGIGARVSGANSPGPPPIEEETSYGD 1325
WD40-rpts                                                   

1 WD40-repeats found in QUERY=ENSDARP00000103591 (Len=1325):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 23   587-668      3.71  267.84  0.01520       27.5%     16.41

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  587-668    DG--LRTLAVAYRDLSEEQWDEWSERFRGADKATDCREDRLAAAYEEIEQDMMLLGATAIEDKLQEGVPETIAILSLANIKIWV

   WD40 Template    TGECLRTLSGHTSGVT---------------SVSFS-------------PDGKRLVSGS-----EDG-----------TIKVWD