Input parameters:

  Query = ENSDARP00000103454 (Len=663)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000103454, Len=663):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MATSTSLDPELVREVLECPICLETYNQDQLRPKLLQCGHSVCRQCLEKLLASTINGVRCPFCSKVSRMSSISQLADNLTV 80  
WD40-rpts                                                                                      

Query       81 LKIIDCASACSSNMGLMCKSCKNRLPRQYCCDCSIVLCDICKNEGHQRQGHVVQAIRMAAELRRKDIGAKLSDLREAMGN 160 
WD40-rpts                                                                                      

Query      161 IQKKKAAIDNVTKSLRMKYKAVQQEYAKAELRLQEELGRSRRAFAASLAEIEKLNAQILEEQTYLLNIAEVQVVSRCDYL 240 
WD40-rpts                                                                                      

Query      241 TMRIKQTDIALLEEGSNNDEEEDLDLKTNLPVVLKLQDPELVKIENSKSLEVGQLTTKPCNVNVEEEEDGLDFPTATSAP 320 
WD40-rpts                                                                                      

Query      321 LDIYRDIDMVPAVEEAVCASPGSFKSKSVDGGGPSPGASGGQLCQFVKKMGCKGNLPGMFNLPVSICVTLQGEVLVADRG 400 
WD40-rpts                                                      (_________________WD 1__________

Query      401 NYRIQIFNRKGFQREIRRNPSSIDNFVLSFLGADLPNLIPLSIAITAQGLIGVTDNYDNSVKVYTTDGHCIACHKNQLIK 480 
WD40-rpts      _______)                                                           (____________

Query      481 PWGIAAMPSGQFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAVRPKFVTCDSSGTVYFTQGLGLNIENRHNEHHLEGGFS 560 
WD40-rpts      _____WD 2________________)                                                      

Query      561 IGSVGMDGQLGKQLSHFFSETEDFRCITGMCVDSNGDLIVTDSGRKEILQFPKEGGYNILIQEGLTCPVGVAVTQKGQLL 640 
WD40-rpts                                                                                      

Query      641 VLDCWDHCVKVYTYLQRRRSSTC 663 
WD40-rpts                             

2 WD40-repeats found in QUERY=ENSDARP00000103454 (Len=663):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   369-408      2.83  231.58  0.04612       20.0%     28.64
  WD 2:  Seg 12   468-506      2.79  230.11  0.04822       20.0%     45.85

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  369-408    KMGCKGNLPGMFNLPVSICVTLQGEVLVADRGNYRIQIFN
   WD 2  468-506    -GHCIACHKNQLIKPWGIAAMPSGQFVVSDVEGGKLWCLA

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD