Input parameters:

  Query = ENSDARP00000103381 (Len=674)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000103381, Len=674):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 RYGGWEFGKPLPIDLKMDMLDVPANRTLSKVWYNSEGHHSMPAYLNSLNNFFLRSSLPPEKRYQYAISISSHPYPGQVQD 80  
WD40-rpts                                                                                      

Query       81 EDLMVGGLVSILVALCVLTGYSIMTASFVIYEVQEHHTGSKRLQQISGISEPFYWIINFFYDMALYMIPVVLSVVMVAAF 160 
WD40-rpts                                                                                      

Query      161 QLPAFTERQNLAAVTLLLVLFGSATFPWMYLLSAMFKDTEMAFIGYVCINLFISVNTIISTSIIYFLGQLNQNDQSIQNI 240 
WD40-rpts                                                                                      

Query      241 YQTMSNIFLVFPQFSFGNGLMELARVDMQVQILSGFGVDAYKNPFSMDVLGWMFISMFLQGFICFTLRLLLNKTLLRKVR 320 
WD40-rpts                                                                                      

Query      321 KRNAVQSYSPNEDEDVLDERLRVGRGDASSDILQVNHLTKVYQNFSKRVQAVKSLSVGIPAGECFGLLGVNGAGKTTTFK 400 
WD40-rpts                                                                                      

Query      401 MLTGDISPSGGSAKIRDIDGRMVDIIDCRREGINIGYCPQVDALDDLLTGEEHLYFYARIRGISKRDISQVVNYLLKKLQ 480 
WD40-rpts                                                                                      

Query      481 LNYHRNNTSESYSCGTRRKLSTALALIGNPQILLLDEPSSGMDPRSKRHLWKIISEQVMGKCAVVLTSHSMEECEALCTR 560 
WD40-rpts                                                                (_____________________

Query      561 LAIMVKGQFRCLGSLQHIKNRFGSGFTVKMYLTGASYDVDMISNFMQQNFPGTCLKDNHSNMVEYHVPVAPGGVASIFSL 640 
WD40-rpts      ___WD 1________________________)                                                

Query      641 LESNKTVLQIKHFSVSQTTLDEVFINFATAKVDT 674 
WD40-rpts                                        

1 WD40-repeats found in QUERY=ENSDARP00000103381 (Len=674):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 11   539-592      2.96  237.03  0.03908       25.0%     28.58

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  539-592    MGKCAVVLTSHSMEECEALC--TRLAIMVKGQFRCLGSLQHIKNRFGSGFTVKMYL

   WD40 Template    TGECLRTLSGHT-------SGVTSVSFSPDGKRLVSGS---------EDGTIKVWD