Input parameters:

  Query = ENSDARP00000103234 (Len=707)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000103234, Len=707):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSFCLAELHLWSFRNSLQVPDRDIGTYQLYEKGEPASPTDQHYYNEKQQFADSRGYPWFLSNRRPEKLRDALKELEELLQ 80  
WD40-rpts                                                                                      

Query       81 SCPVMSVRWRSKQCCQMLLRSGVLVTLILGGAQVERVVIDRTLVGRLPADTISDAVIGDRFLLFSLMERSQVCQVYLNRK 160 
WD40-rpts                                                                                      

Query      161 NQSSPDLARHMEKLTAAEIKVSVADLPGGGRRVERHLGLNRTQDVAVCWWPLCNEEVRPWSPIPSAADRANLVLLACSDT 240 
WD40-rpts                                                                                      

Query      241 PGLTVLSSIRTDGDPIDCRFSLTQPYHILTVELHQDTKHSTSESLEEIQHPDIQTCVYELTRGRLQRLSSISLTLTSKPI 320 
WD40-rpts                                                                  (___________________

Query      321 TCSRDPLERWVVLGLQDCSVVLFDPQTGLSQWATCSMMPAVLAWHPSGSLLVVGGGQGELQCFDMGFSPLPLRLVSEEPV 400 
WD40-rpts      WD 1___________________)(_________________WD 2_________________)                

Query      401 PGSVGSSLQLSQHFNTSEGLEGIQWAYCPISQGNESLEVHDLLLLRFHGGPLAALRLKLGVFNGAQLGPCDLILHRLLCE 480 
WD40-rpts                                                                                      

Query      481 EVDAALGILGNMDWAIMGAECYRSLISITDHLLRKPLDQQTEGQLEAALGVFYAPCRPLSNTVILEYRDPISRYARRFFH 560 
WD40-rpts                                                                                      

Query      561 HLLRHQRFEKAFLLAVDIGARDLFMDLHYVAADKGEVVLAAVAKKKANEIDAEAQTSAPDECQSAYGGQSGVKLPATISE 640 
WD40-rpts                                                                                      

Query      641 RHVHDLKHWSTASRAVETSSSKAQDDLSNTQTSHSSWPWKHTEINLVDQNTQGPEEGKLKVIHFGLV 707 
WD40-rpts                                                                         

2 WD40-repeats found in QUERY=ENSDARP00000103234 (Len=707):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 18   301-344      3.66  265.77  0.01620       30.0%     35.62
  WD 2:  Seg 21   345-384      3.76  270.17  0.01415       20.0%     37.10

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  301-344    TRGRLQRLSSISLTLTSKPITCSRDPLERWVVLGLQDCSVVLFD
   WD 2  345-384    PQTGLSQWAT----CSMMPAVLAWHPSGSLLVVGGGQGELQCFD

   WD40 Template    TGECLRTLSG----HTSGVTSVSFSPDGKRLVSGSEDGTIKVWD